Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02094 ATGGCGACAGCAAAACCCCAAAGGACTCCTCAAGAAGTTGAGGACATAATTCTTCGCAAAATCTTCCTTGTTTCCCTCACCGATTCCATGGAAACCGATCCCAGAGTCGTTTACTTGGAATTGACAGCTGCTGAGATTCTCAGCGAAGGAAAGGAATTGAAGCTCTCACGAGATTTGATGGAAAGGATTCTGATTGATCGCCTTTCCAGGAATTTCCCTTCGGCGGAACTACCTTTTCAGTACTTAATCGGCTGCTATCGACGCGCATATGATGAAGGTAAGAAAATTGCTAATATGAAAGATAAGAATTTGAGGGGTGAGATGGAGTCGGTGGTGAAGCAAGCGAAGAAATTGTGTGTATCTTATTGTAGAATTCATTTGGCGAATCCTGATCTGTTTCAAAGTGAGAATACTAGTGCGAAGAAACCGGAAACCTCGCCCTTGTTACCACTGATTTACTCGGAGGTTGGTAGCAGCATAAATGGCTATGGCGGGAGTAGCAGTGCAGGGGGAATTCAGAGTCCACCTGGGTTTTTGGAGGAGTTTTTCAGGGACTCAGACTATGATAGTCTGGACCCAATACTCAAAGGGTTGTATGAGGACTTGAGGGGTAGTGTTTTGAAAGTTTCAGCTTTAGGGAATTTCCAAGATCCTTTGAGAGCGTTGCTGTTTTTGGTTAGATTTCCCATTGGTGCAAAGTCTCTTGTGAATCATCCTTGGTGGATTCCAAAAGGAACATATATGAATGGACGTGCCACTGAAATGACGAGCATTTTGGGTCCTTTTTTTCACATTAGCGCTCTTCCTGATCCTACCTTTTTCAAGAGCCAGCCCGATGTTGGTCAGCAGTGCTTTTCAGACGCATCTACTCGCCGACCATCAGATTTGTTGTCCTCGTTTACGACAATCAAAACTGTAATGAATAGCTTATATGATGGCCTAGCTGAAGTTCTCCTCATTCTCCTGAAAAGTACGGATACTCGTGAAAATGTACTTGAGTATCTTGCAGATGTCATCAACAAAAATGTATCCAGAGCTCATATACAGgTTGATCCTATGTCTTGTGCAAGTTCAGGCATGTTTGTGAATCTCAGTGCTGTCATGCTTCGTCTATGTGAGCCATTTTTAGATGCGACTTtaacaaaaagagataaaattgatccAAAATATGTACACCATTCTAATCGTTTGGAGTTGAGTGGGTTGACTGCTCTTCATGCATCATCCGAAGAAGTTTCTGAATGGCTTAACAGCGACAAAACATCTAAAGTTGATGGcattaatcaatataatgaTGGTGAGAAACGTTTGAAACAATCTCAAGAAGCCACCAGTTCTGGTAGTAATGATGCTGATGAGCCTTCTACTGCAAAGTCTGCATCTAACgctgaaaagacaaaatatacatttatctGTGAATGTTTCTTTATGACTGCAAGAGTGCTCAACTTAGGGCTTCTAAAAGCATTTTCTGACTTCAAACACTTAGTTCAGgATATTTCTAGGTGTGAAGATACACTTTCCACACTTAAGGCAATGCAGGGGCAGACCCCCTCTCGTCAACTGGAGTTGGATATATCCCgactggaaaaagaaatagagttGTACTCACAGGAAAAACTTTGTTATGAAGCTCAAATATTGAGGgacaACACACTTATCCAGAATGCACTTACCTTTTATCGCCTGATGGTGGTTTGGTTGGTTGGCTTGGTTGGTGGATTTAAAATGCCTCTACCATCAACTTGCCCAATGGTGTTTGCAGCTATGCCTGAGCATTTTGTAGAAGATGCCATGGAACTCCTAATATTTGCTTCCAGGATTCCAAAAGCCTTAGATGGTGTTTTTCTGGACGatttcatgaattttataattatgttcaTGGCCAGTCCAAATTATACCAAGAACCCATATCTGAGAGCAAAAATGGTTGAAGTCTTAAACTGCTGGATGCCCCGTAGGAGTGGCTCATCTGCTACAACCACTCTATTTGAAGGGCACCAACTGTCTCTTGAGTATCTTGTGAGGAATCTTTTGAAGCTTTATGTTGACATCGAGTTCACTGGTTCTCACACCCAGTTCTATGACAAGTTTAACATTCGCCATAATATTGCCGAACTCCTTGAATACCTGTGGCAGGTCCCTAGTCATCGTAATGCTTGGAGAAAGATTGctaaagaagaggaaaagggTGTCTATCTGAATTTCTTGAACTTTCTGATTAATGATAGCATCTATCTTCTTGATGAAAGTCTGAACAAAATTCTTGAACTAAAAGAATTGGAAGCTGAGATGTCAAATACAGCTGAATGGGAGCGACGACCAGCTCAAGAGAGGCAGGAGAGGACCCGGCAATTCCATTCTCAAGAAAATATTATTCGGATAGACATGAAATTGGCAAACGAAGATGTGAGTATGCTTGCATTCACTTCAGAGCAGATCACAGCTCCATTCCTACTTCCTGAGATGGTTGACAGAGTAGCCAGCATGCTTAATTACTTTCTGTTGCAACTGGTGGGTCCTCAAAGAAAATCGCTTAGTCTGAAAGATcctgaaaaatatgaatttcgTCCAAAGCATTTGCTTAAACAGATTGTGCATATATACGTTCATCTAGAAAGGGGTGATGCCGACAACATCTTTCCAGCGGCCATATCCAAGGATGGTCGATCATACAATGATCAGTTGTTTAGTGATGCAGCCGATGTCCTCCGGAAAATAGGTGAGGATGGAAGAATAATACAGGAATTTATTGAACTTGGTAATAAAGCGAAAGTTGCAGCTTCAGAGGCCATGGATGCCGAAGCTGCCCTCGGAGATATACCAGAGGAATTCCTTGATCCAATTCAATACACTTTGATGAAAGATCCAGTGATCTTACCTTCCTCAAGGACCACCGTTGACCGTGCTGTCATTCAGAGGCATCTTCTTAGTGATAATACTGACCCATTCAACCGTTCTCATCTTTCTGTGGATATGCTGATTCCTGACAATGAACTTAAGgcaaaaattgaagagtttgTCAAATCCCAGCAATTGAAGAAACGCGGTGAAGGTCTAAGCATCCAGAGTTCCACTTCCAAGGACACAATTCAGACCACCGCTGGAGAAATGTTGATTGATTA 3125 0.4022 MATAKPQRTPQEVEDIILRKIFLVSLTDSMETDPRVVYLELTAAEILSEGKELKLSRDLMERILIDRLSRNFPSAELPFQYLIGCYRRAYDEGKKIANMKDKNLRGEMESVVKQAKKLCVSYCRIHLANPDLFQSENTSAKKPETSPLLPLIYSEVGSSINGYGGSSSAGGIQSPPGFLEEFFRDSDYDSLDPILKGLYEDLRGSVLKVSALGNFQDPLRALLFLVRFPIGAKSLVNHPWWIPKGTYMNGRATEMTSILGPFFHISALPDPTFFKSQPDVGQQCFSDASTRRPSDLLSSFTTIKTVMNSLYDGLAEVLLILLKSTDTRENVLEYLADVINKNVSRAHIQVDPMSCASSGMFVNLSAVMLRLCEPFLDATLTKRDKIDPKYVHHSNRLELSGLTALHASSEEVSEWLNSDKTSKVDGINQYNDGEKRLKQSQEATSSGSNDADEPSTAKSASNAEKTKYTFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTLKAMQGQTPSRQLELDISRLEKEIELYSQEKLCYEAQILRDNTLIQNALTFYRLMVVWLVGLVGGFKMPLPSTCPMVFAAMPEHFVEDAMELLIFASRIPKALDGVFLDDFMNFIIMFMASPNYTKNPYLRAKMVEVLNCWMPRRSGSSATTTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRKIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRQFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVDRVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVHIYVHLERGDADNIFPAAISKDGRSYNDQLFSDAADVLRKIGEDGRIIQEFIELGNKAKVAASEAMDAEAALGDIPEEFLDPIQYTLMKDPVILPSSRTTVDRAVIQRHLLSDNTDPFNRSHLSVDMLIPDNELKAKIEEFVKSQQLKKRGEGLSIQSSTSKDTIQTTAGEMLID 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02094 1041 Coils Coil 519 546 - -
Bva03g02094 1041 CDD RING-Ubox_UBE4A 943 1012 - -
Bva03g02094 1041 MobiDBLite consensus disorder prediction 440 460 - -
Bva03g02094 1041 Pfam Ubiquitin elongating factor core 259 924 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Bva03g02094 1041 MobiDBLite consensus disorder prediction 1018 1034 - -
Bva03g02094 1041 MobiDBLite consensus disorder prediction 1018 1041 - -
Bva03g02094 1041 PANTHER - 1 1016 - -
Bva03g02094 1041 SMART Ubox_2 944 1007 IPR003613 GO:0004842|GO:0016567
Bva03g02094 1041 Pfam U-box domain 941 1012 IPR003613 GO:0004842|GO:0016567
Bva03g02094 1041 ProSiteProfiles U-box domain profile. 940 1014 IPR003613 GO:0004842|GO:0016567
Bva03g02094 1041 SUPERFAMILY RING/U-box 933 1012 - -
Bva03g02094 1041 PANTHER UBIQUITINATION FACTOR E4 1 1016 IPR045132 GO:0000151|GO:0030433|GO:0034450
Bva03g02094 1041 MobiDBLite consensus disorder prediction 436 460 - -
Bva03g02094 1041 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 940 1018 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02094 1 1041 U-box Gene Family AT5G15400 77.333 0.0 1655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02094 K10597 - gmx:100806175 1678.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02094 03 18496384 18504508 Bva03g02094 03 18496384 18504508 ECH