Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02092 ATGCCCACCGATCTCTTCTCTCTTGTCAGGTGGATTTGTGGGAAGGATCGTCCAATTAGAAGTAGCAGTAGCAGCGGCGGGGATAGCAGCAACGACGTCGTTGTGGATGAGAGTCCAAGCTCCACCTCGGTGGAGTGCTATGCTTGCACCCAAGTCGGGGTTCCCGTGTTCCACTCCACCAGCTGCGACCGTGCTCACCAGCCACAATGGGAGGCTTCTGCTGGCTCTTCGTTAATCCCTATCCAGAACCGAACCAAGAACCCGTCTCGCGTCGTAGCCAGACCCAGCTCGGGACCGTTCGGAAAAGTGCTTGACCCGCGAAGCAAGCGCGTGCAGAAGTGGAACCGCACGTGCCTGTTGGTGCGCGCCATGGCGCTGGCCATTGACCCGCTGTTTTTCTACGCGCTGTCGATAGGAAGAAACGGAGCACCGTGCCTGTACATGGACGGCGGCTTGGCGGCGATCGTGACGGTGCTTCGCACGTGCGTGGATGCGGTGCATATATTCCATTTGTGGCTGCAGTTTCGGCTTGCCTACGTGTCGAGGGAGTCTCTGGTGGTGGGGTGCGGGAAGCTCGTCTGGGACGCACGTACAATAGCTTCTCACTATTTGCGCTCCCTCAAGGGATTTTGGTTCGATGTGTTCGTGATCCTCCCCGTCCCCCagGTGGTGTTTTGGTTAATAGTgcccaaattaataagagaagAGCGAATTAAAGTGATAATGACCATACTACTGATAATATTCTTATTCCAATTTCTTCCAAAGGTTTATCACATCATTTACttgatgagaaaaatgcaGAAGGTCACAGGCTACATATTTGGCACCATTTGGTGGGGTTTTGGCCTCAATCTCATAGCTTACTTCATTGCTTCTCATGTTGCCGGAGGGTGCTGGTATGTTCTTGCAATTCAACGAGTTGCGTCATGCCTCCGGCAACAGTGTGAACGAGGTGGGAATTGCAATCTGTCTCTGTCGTGTTCAGAGGAGGTGTGCTATCGGTTCATGCTACCAACAGGCACTGTGGGAAATCCATGTGGTGGAAACACAACAGTGGTGACGCGAAAGCCATTGTGCTTAGATGTTCAAGGACCTTTCAAGTATGGGATTTACCAATGGGCTCTTCCAGTCATATCTAGCAATTCCTTGAATGTCAAGAttctttattccattttttggGGTTTGATGACCCTAAGCACATTTGGCAATGAGCTTGAACCCACGAGTCACTGGCTAGAAGTGACTTTCAGCATATGCATAGTGCTGAGTGGGCTATTGCTCTTCACCTTGTTGATTGGTAACATCCAGGTGTTCTTACACGCAGTCATGGCAAATAGGAGAAAAATGCAGCTAAGATATCGTGACATGGAGTGGTGGATGAGGAGGAGACAGCTGCCATCGCGATTGCGCCAAAGAGTTCGCCAGTTTGAACGTCATAGATGGGCAGCGCTGGGAGGAGAATTGGATGAAATGGCCATCGTCAAAGACTTGCCCGAAGGACTTAGAAGGGACATCAAGCGCTTTCTTTGTCTAGATCTCATAAAAAAGGTACCACTTTTCCACAATTTGGATGATATTATTCTTGACAACATTTGTGATAGGGTCAAGCCCCTTGTCTTCTCTAAGGAAGAAAAGATAATTAGAGAAGGAGACCCGGTACGACAAATGGTGTTCATAGTCCGTGGACACATAAAACGGCACCAAAGCCTGAGCAAGGGCTTGGTCGCCACGAGCATGATCGAAGCCGGAGGGTTTTTGGGCGACGAGCTGCTCTCCTATTGCCTCCGCCGGCCCTTCATAGACCGGCTGCCGGCGTCGTCCGCGACATTCGTCTGCATTGAATCAACGGAAGCCTTTGGCCTCGATGCAGAAAATCTCAAGTACATCGCCGATCACTTCCGTTACAAATTCAACAACGAGAGTCTGAAGCGCACGGCGAGGTATTACTCATCGAATTGGCGGACCTGGGCCGCCGTCAACATCCAATTTGCTTGGCGGCGTTACAGGCAGAGGACCAGAGGTCGGGTGACCCCTGTAATGGACATGGGTGCAACGGATTCAGCAGAACGTCGGCTCCTCCAGTATGCTGCAATGTTCATGTCGTTCAGGCCACACGACCATCTTGAATG 2132 0.5009 MPTDLFSLVRWICGKDRPIRSSSSSGGDSSNDVVVDESPSSTSVECYACTQVGVPVFHSTSCDRAHQPQWEASAGSSLIPIQNRTKNPSRVVARPSSGPFGKVLDPRSKRVQKWNRTCLLVRAMALAIDPLFFYALSIGRNGAPCLYMDGGLAAIVTVLRTCVDAVHIFHLWLQFRLAYVSRESLVVGCGKLVWDARTIASHYLRSLKGFWFDVFVILPVPQVVFWLIVPKLIREERIKVIMTILLIIFLFQFLPKVYHIIYLMRKMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERGGNCNLSLSCSEEVCYRFMLPTGTVGNPCGGNTTVVTRKPLCLDVQGPFKYGIYQWALPVISSNSLNVKILYSIFWGLMTLSTFGNELEPTSHWLEVTFSICIVLSGLLLFTLLIGNIQVFLHAVMANRRKMQLRYRDMEWWMRRRQLPSRLRQRVRQFERHRWAALGGELDEMAIVKDLPEGLRRDIKRFLCLDLIKKVPLFHNLDDIILDNICDRVKPLVFSKEEKIIREGDPVRQMVFIVRGHIKRHQSLSKGLVATSMIEAGGFLGDELLSYCLRRPFIDRLPASSATFVCIESTEAFGLDAENLKYIADHFRYKFNNESLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGRVTPVMDMGATDSAERRLLQYAAMFMSFRPHDHLE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02092 710 ProSiteProfiles cAMP/cGMP binding motif profile. 520 630 IPR000595 -
Bva03g02092 710 CDD CAP_ED 520 630 IPR000595 -
Bva03g02092 710 Gene3D Helix hairpin bin 445 511 - -
Bva03g02092 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 46 710 - -
Bva03g02092 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 46 710 - -
Bva03g02092 710 Gene3D Jelly Rolls 518 636 IPR014710 -
Bva03g02092 710 Pfam Ion transport protein 114 437 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva03g02092 710 SUPERFAMILY cAMP-binding domain-like 446 634 IPR018490 -
Bva03g02092 710 SUPERFAMILY Voltage-gated potassium channels 105 440 - -
Bva03g02092 710 Gene3D - 144 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02092 Bva-Chr3 18481115 18487171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02092 37 710 Ion Channels AT5G15410 76.393 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02092 K05391 - jre:108987412 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02092 03 18481115 18487171 Bva03g02092 03 18481115 18487171 ECH