Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02074 ATGAGATTGAACAATATAAAACAACTCTTCCTCGGAGCATCAGATCCAGGCAACCACATTACCACGtgcaagaaaaacaagaagctTCTCTTAGCCATCTTCGCTGCTCTGATTCTTGTGGCTGCCATTATTGGCATTGTCGTCCACAACAGCGTCAACTCCATCCACAAAAGCAATGTCGATTTCCCCCAATCACATGTCATAATCAGAACCTCTTGTAACATCACATTGTACCCAGAACTGTGCTTCTCTGCCATTGCCTCTGAAACTGATGCAGCAGACAGAGTCTCCAGCCAAAGAGATAGAGTTGTCTATAAACTAGCTGTTCAGCACAATTACTTCACTGTTGAGAAGCTCTCAGCCAAAAAGGGACTCACCGAAAGAGAGAAAACTGCTCTCCATGATTGCTTGGAGACCAGTGATGAGACCCTCGACGAGCTTGAGAAGACTCTGATAGATCTCCGAGAGAACCCAAACAAGAAGTCCTTCACAAAGCACGCAAATGACCTCAAGACTCTGATCAGCGCCGCCATTACCAACCAAGTCACTTGCTTGGATGGGTTCTATAACGATGGTAACAAGGAAATCAAGGAAGCTCTGCAAGATGGGCATGTGCACATGTGCAGCAACGCATTGGCTATGATATA 647 0.4451 MRLNNIKQLFLGASDPGNHITTCKKNKKLLLAIFAALILVAAIIGIVVHNSVNSIHKSNVDFPQSHVIIRTSCNITLYPELCFSAIASETDAADRVSSQRDRVVYKLAVQHNYFTVEKLSAKKGLTEREKTALHDCLETSDETLDELEKTLIDLRENPNKKSFTKHANDLKTLISAAITNQVTCLDGFYNDGNKEIKEALQDGHVHMCSNALAMI 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02074 215 CDD PMEI-like_3 71 215 - -
Bva03g02074 215 Pfam Plant invertase/pectin methylesterase inhibitor 69 214 IPR006501 GO:0004857
Bva03g02074 215 PANTHER PECTINESTERASE 29 215 - -
Bva03g02074 215 PANTHER PECTINESTERASE 29 215 - -
Bva03g02074 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 215 IPR035513 -
Bva03g02074 215 TIGRFAM PME_inhib: pectinesterase inhibitor domain 54 214 IPR006501 GO:0004857
Bva03g02074 215 SMART PMEI_2 64 214 IPR006501 GO:0004857
Bva03g02074 215 Coils Coil 137 157 - -
Bva03g02074 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 215 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02074 Bva-Chr3 18358871 18359939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02074 24 215 Carbohydrate Esterase AT3G14310 53.202 1.55e-52 176