Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02051 ATGGCCGTGCAGGATTCTCAGGTCACGAATCagttagagagagaagaaagccTAATTGCTGCAGCAAGACATATTATGAGGGTATTAGGATCAAATAAGAAACTCACTAGTGATGCTAAGAAAATTCTGGCTGATCTTGGCAGCCAATTGTCCTCCATGACCAAACCCAGTGACATGGAgcaggaggaggaggagggaGTTAATTCAATTGAAGATAGGATTAATGctattgaagagaaaattttgaaatgggAGGAAGATCAGTATACGTTTTGGAATTCAAGGCCAGGTGAAGCATCTGAATATCTGAATGCTGCCGATGAAGCTCGCCGATTGATTGAAAGTTTGGAGCGTCTGCAACTGAACAAAGAGGACCAAGAGTATAAATTCTTGCTGAGGGCCCATTATGTTCTTCAAACAGCTATGGCTCGGCTTGAAGAGCAGTTCAAGAACTTGATTTTCCAGAACCAGCTGTCCTTTGAACAcgattatgtttctttttggtCCGGGGATGAGAGCTCTATAGTCTCTTTAGGTGATGAATCAATTGAGGAATTACATCAAAGAAGCAGTGCCAGCAGACCCTCAGAGGAGCATACCATTGATTTGGTTCGTCCAGGTGTGATCCCAGAGCTCAGGTGTATTGCAAAGTTAATGTTTGCCTCAAATTATGATCAGGAATGTTCACAAGCCTATACCACAGTCCGGAGGGAAGCATTAGATGAGTGCCTCTACATTCTTGATATGGAAAGACCGAGTATTGAGGATGTCTTGAGAATGGATTGGGGCACcctaaattcaaaaatcaaaaggtGGGTTTGGGCTGTGAAAATCTTTGTTAGGGTGTATCTTGCAAGTGAGAAGTGGCTCAGTGACCAGATTTTTGGGGAGGGGGAACCAATTAGTATAGTTTGTTTCGTTGATGCATCAAAGACTTCCATATTACAGCTTTTGAATTTTAGTGAAGCTATGTCAATTGGCCCACACCAACCTGAGAAACTGTTTCGCATTCTTGACATGTACGAGGTTCTAGCTGACCTTATGCCGGACTTAAATGCTTTATATCCGGATGAGGTTGGTTCTTCTGTTAGAACTGAATGCCATGAGGTTCTAAAGAGATTAGGTGATTGTGTGCGAGCAACAttcattgaatttgaaaatgccATAGCATCAAACGCATCATCCACTCCTTTTGTGGGTGGCGGAATTCATCTTTTGACCAGATATGTGATGAATTATATAATGACCCTTACTGAGTACAGTAAGACCCTTAATCTGGTTCTGAAGGATGCAGATGCAGAAGAAGACAGCAAAAGCCAGGGATCTGCAGGAAGATTATCCTCAACGGTGTTCCACTTTCGATCAGTTGCTTCGATCCTGGAATGCAACCTTGAAGAGAAGTCCAAGTTATACAGGGAAGCACCCTTGCAGCACTTATTCTTAATGAACAATGTACATTATATGGCTGAAAAGGTGAAGGGGTCTGAACTTAGGCTCATATACGGAGATGAATGGATCCGAAGGCACAGCTGGAAATTTCAACAGCATGCGATGAATTATGAGAGAGCCAGTTGGAGTTCCATTCTCTCCTTGCTCAAGGATGAAGGAATTCAAACTCCTGGTACAACCTCTATCTCAAGGAATCTTCTTAAGGAGAGGTTACGGAGCTTCTACCTTGCCTTTGAGGATGTTTACAGGATCCAAACAGCTTGGCTCATCCCGGACGTTCAGCTCCGCGAAGACTTGCACATCTCTATATCCCTTAAGGTGATTCAAGCTTACAGGACATTTGTAGGGAGACATAGTGCTCACATAAGTGACAAACACATTAAGTACAATGCTGATGATTtagaaaaattcctttttgatttctttgagGGATCAACCAAATCATTGCAAAATCCCCACAAGAGATG 1916 0.3967 MAVQDSQVTNQLEREESLIAAARHIMRVLGSNKKLTSDAKKILADLGSQLSSMTKPSDMEQEEEEGVNSIEDRINAIEEKILKWEEDQYTFWNSRPGEASEYLNAADEARRLIESLERLQLNKEDQEYKFLLRAHYVLQTAMARLEEQFKNLIFQNQLSFEHDYVSFWSGDESSIVSLGDESIEELHQRSSASRPSEEHTIDLVRPGVIPELRCIAKLMFASNYDQECSQAYTTVRREALDECLYILDMERPSIEDVLRMDWGTLNSKIKRWVWAVKIFVRVYLASEKWLSDQIFGEGEPISIVCFVDASKTSILQLLNFSEAMSIGPHQPEKLFRILDMYEVLADLMPDLNALYPDEVGSSVRTECHEVLKRLGDCVRATFIEFENAIASNASSTPFVGGGIHLLTRYVMNYIMTLTEYSKTLNLVLKDADAEEDSKSQGSAGRLSSTVFHFRSVASILECNLEEKSKLYREAPLQHLFLMNNVHYMAEKVKGSELRLIYGDEWIRRHSWKFQQHAMNYERASWSSILSLLKDEGIQTPGTTSISRNLLKERLRSFYLAFEDVYRIQTAWLIPDVQLREDLHISISLKVIQAYRTFVGRHSAHISDKHIKYNADDLEKFLFDFFEGSTKSLQNPHKR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02051 638 Pfam Exo70 exocyst complex subunit 270 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bva03g02051 638 Gene3D Exocyst complex component Exo70 83 634 - -
Bva03g02051 638 Coils Coil 60 87 - -
Bva03g02051 638 PANTHER EXOCYST COMPLEX PROTEIN EXO70 21 631 IPR004140 GO:0000145|GO:0006887
Bva03g02051 638 SUPERFAMILY Cullin repeat-like 70 626 IPR016159 -
Bva03g02051 638 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 21 631 - -
Bva03g02051 638 Coils Coil 99 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02051 Bva-Chr3 18251716 18254232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02051 11 638 EXO70 exocyst subunit family AT3G29400 46.445 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02051 K07195 - gmx:100799102 953.355