LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva03g02050	ATGGAAAAGAAGCAGATCTTTGTTTATATCTTGCTTCTTTTGTTCATGGTCATGCTCAGAGGAGCAAAAGcagagaaaggagaagaagaagctgataGGATTCTGGAACTCCCCGGCCAACCCAAGGTCTCTTTTCAGCAGTTCTCTGGCTATGTGACTGTGAACCAGGTTGCTGGTAGAGCCCTCTTTTACTGGCTCACTGAAGCCACCAACAATCCCTTGACCAAACCTCTGGTCATTTGGCTCAATGGAGGTCCGGGTTGTTCATCGGTGGCATATGGAGCATCCGAAGAAATAGGTCCATTCCGAATAAACAAAACAGCTTCAGGGCTATACCTTAACAAGTTCTCATGGAACACCGAGGCCAACGTCTTGTTCTTGGAGACTCCCGCCGGCGTCGGCTTCTCCTACAGCAACCGGTCATCGGACCTGCTCGACACCGGCGACCACCGCACAGCTAAAGATTCTCTGGAGTTCGTAATTCGATGGCTAGAAAGATTTCCACGTTATAAGAATCGAGAAGTTTATATCACAGGAGAGAGCTATGCAGGCCACTATGTCCCTCAATTAGCCAAAGAAATCATGAGCTACAACACAAAAGCTAAGCACCCCATCAACCTCAAAGGAATAATGGTTGGCAATGCAGTCACGGACAACTACTATGATAACCTAGGCACGGTCACATACTGGTGGAGCCACGCTATGATCTCCGATCAGACTTACCGGCAACTCATAAACACCTGTGATTTTCACCGGCAGAAAGAATCCGACGAGTGCGAATCGTTGTATAGTTATGCCATGGATCAAGAATTTGGCAACATTGATCAGTACAACATCTATGCACCTCCATGCAACGTTAAATCAGACGGCGGCTCCGGCGCTACCCGCCACGCCATGCGCTTACCTCACCGTCCTCATCATCCGATTTTCAGGAAAATGGCTGGGTATGATCCCTGTACGGAGAAATATGCTGAGATTTACTACAACAGGCCGGATGTTCAGAAAGCACTTCATGCTAACAAAACTGGTATTCCTTACAAGTGGACTGCTTGCAGTGAGATTTTAAATCGAAACTGGAATGATACAGATGTATCAATTCTTCCAATTTACAATGAGTTGATTGCTCATGGAATAAGGATTTGGGTTTTCAGTGGGGACGTTGACTCTGTGGTGCCTGTAACAGCAACTAGATATTCCCTCGCAGTGCTGAAACTGACAACCAAAATTTCTTGGTACCCTTGGTATGTTAAGAATCAGGTTGGAGGGTGGACAGAGGTGTATGAGGGGCTGACATTTGCAACAGTGAGAGGAGCAGGACATGAAGTGCCACTATTCAAGCCCAGAGCTGCCCTGCAGTTATTGAAATCATTTCTTGCAGGAAAGCCTCTTCCAAAGTCCTG	1400	0.46	MEKKQIFVYILLLLFMVMLRGAKAEKGEEEADRILELPGQPKVSFQQFSGYVTVNQVAGRALFYWLTEATNNPLTKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKFSWNTEANVLFLETPAGVGFSYSNRSSDLLDTGDHRTAKDSLEFVIRWLERFPRYKNREVYITGESYAGHYVPQLAKEIMSYNTKAKHPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLINTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNVKSDGGSGATRHAMRLPHRPHHPIFRKMAGYDPCTEKYAEIYYNRPDVQKALHANKTGIPYKWTACSEILNRNWNDTDVSILPIYNELIAHGIRIWVFSGDVDSVVPVTATRYSLAVLKLTTKISWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLLKSFLAGKPLPKS	466

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva03g02050	466	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	11	465	IPR001563	GO:0004185\|GO:0006508
	Bva03g02050	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	127	137	IPR001563	GO:0004185\|GO:0006508
	Bva03g02050	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	430	443	IPR001563	GO:0004185\|GO:0006508
	Bva03g02050	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	114	126	IPR001563	GO:0004185\|GO:0006508
	Bva03g02050	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	163	188	IPR001563	GO:0004185\|GO:0006508
	Bva03g02050	466	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 25	11	465	-	-
	Bva03g02050	466	Gene3D	-	319	356	-	-
	Bva03g02050	466	Gene3D	alpha/beta hydrolase	28	286	IPR029058	-
	Bva03g02050	466	Pfam	Serine carboxypeptidase	39	459	IPR001563	GO:0004185\|GO:0006508
	Bva03g02050	466	ProSitePatterns	Serine carboxypeptidases, serine active site.	177	184	IPR018202	GO:0004185
	Bva03g02050	466	Gene3D	-	366	460	-	-
	Bva03g02050	466	ProSitePatterns	Serine carboxypeptidases, histidine active site.	430	447	IPR033124	GO:0004185
	Bva03g02050	466	SUPERFAMILY	alpha/beta-Hydrolases	36	464	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva03g02050	Bva-Chr3	18243440	18249618	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva03g02050	324	463	Calmodulin-binding Proteins	AT2G22960	31.206	8.60e-16	73.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva03g02050	K16297		-	gmx:100807680	842.802