Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02047 ATGTTTTCTACTTCTTCTGCTTCACTGATCAAATGGAGTTTTTTTCACAAACCCATGTCCCCTGTCCTTGTAGTGCAATTATACTTTCTCTTATGGGCTCTGTTCATGTCTCATAGTGACGGGATGTTGACCGATTCGGATAAGTCAGTGCTTATTCAGTTCAAGGGTTCAGTCTCCGATCCATCAGGGCTGCTTTCGAACTGGAATTCTGCTGATTCTGATTACTGTTCTTGGTCTGGTGTCTTCTGTGACTCGAGTTCACGGGTTGTGGCACTCAACATTTCTGGAAATGGAGGTAGAGGTAATAGAAATTCTCTTTCATGTTCCAGCTTTGCCGAATTTCCGTTATATGGGTTTGGAATTAGGAGGAGCTGTGAGAGTAGTAGAGGAGCATTGTTTGGGAAGGTTTCTCCTTTGATCAGTAAGCTTACTGAGCTTAGGGTGTTGTCACTTCCGTTCAACGGTTTTGAGGGTGAAATTCCGGATGAAATCTGGGGTATGGAAAAGTTGGAAGTTCTCGATCTAGAGGGAAACTCCATAACTGGGTCTCTTCCCTTTCGTTTTACTGGTTTGAAGAGTTTGCGGGTTCTTAATCTGGGTTTTAATAAGATTGCAGGGGAAATACCAAGTTCACTTTCAGGTCTTGCAAATCTGGAAATCTTGAATTTAGCTTCAAATAACTTACATGGGTCTATTCCTGGGTTCATTGGTAATTTGAGAGGggcatatttattatttaatctgCTTAGTGGGCCAATTCCGACTGAGATCGGGAAGAATTGTGGGAAGCTTGAGCATCTGGATTTGTCAGGTAATTTTTTAGTTCATGGAATTCCAAGTAGTTTGGGGAATTGTAGTCAATTACGGACACTTTTGCTGTATTCAAATATGTTGGAAAATATCATTCCGTCTGAACTTGGCAATCTTCAGAAGCTTGAAGTATTGGATGTTTCAAGAAATAGTATCAGTGGTCTAATACCTCCTGAACTTGGTAAATGCTCGGAGCTTACTGTACTGGTACTATCAAACCTTTTCAATCCACTTCCAGCAGTCAATAATACAGAAAGGGACTCTTCACTGGATGAGCAATTGGTTACTATAAATGAGGAATCGAATTATTTTGGAGGTGTAATGCCTGAGGAAATTACAAGTCTTCCAAATCTGAGAATATTATGGGCGCCAAGGGCAAATCTTGAAGGAAGTTTTCCTAGCAGCTGGGGTGCTTGTGATAACTTGGAGATGGTTAATCTGGCACAGAATTATTTGACTGGGGGATTTTCCAGACAGCTTAGTCGATGCAAGAAGCtgcattttcttgatttaagTTCAAACAACCTTACCGAGGAGTTAGCTGAAGAGCTTCCTGTTCCCTGTATGACCATGTTTGATGTCAGTGGGAACATCTTATCAGGATCAATTCCTGAATTCACTAAGAACACTTGTCCTGCTGTTCCTTCCTGGAACAGAAAACTGTTTGAATCTGACAATTTTTCTGCTCTATACATATCCTTTTTTGCATCAAAGGTTCATCAGGGAACCTCTTTGCCGTCAGTGGGAGAAGTTGATCTTTCAATTATCCACAACTTTGCACACAACAACTTTTCTGGTGTGCACTCAATGCCAATAGCATCCGACAGACTGGGGAATCAAACTGTTTACACATTTCTTGTTGGAGAAAACAAGCTCACAGGATCATTTCctagaattttatttgagaaatgtGAGGGATTAGATGCATTGCTTTTAAATGTCAGTTATAATAAGTTGTCTGGTCAGATTCCTGCTGATATTGGTGGAATGTGCagatcattaaaatttttggatatCTCTGGGAATCAGATTGCAGGACCTGTTCCCACTGGTTTAGGGGAGTTTGTGTCGCTCATTGGTCTGAACCTCAGTTGCAATCATTTACAAGGTGAGATTCCCGCCACCATTGGCCAGATAAAGCATCTGAAGTTTCTCTCTTTGGCTGGTAATAACTTGACTGGCGCAATTCCTACCAGTGTAGGGCAGTTGTATTCTTTGGAAATCTTGGATCTTTCTTCAAACTCTCTTACTGGAGATATTCCAATGGTAattgaaaacttgaaaaatctGACTGCTCTTCTCCTAAACAACAACAAACTTTCTGGACATGTTCCTGCTGGTCTGGCCAATGTCACTAGGCTCTCATCCTTTAATGTGTCCTTCAATAACTTATCTGGATCCTTACCGTCAAGCAGTAACTTGATAAAATGCAGCAGTGCTATAGGTAATCCACTTCTACGATCTTGTCCTGTATATTCTCTGGCTGTGCCTTCAGCAGATCAGCAAGCGAGGGCTGACGATTCTAGTTCTGACACTGCTACACCACCAGAAGCTACTAGCAGAAAGGGTGGGAATGGCTTCAATTCAATTGAAATAGCTTCAATAACTTCTGCATCAGCCATTGTATCCGTCCTTCTTGCTCtaattgttcttttcttttatacccGGAAGTGGAATCCAAGGTCCAGGGTTACTGGGTCTATGAGAAAAGAGGTTAAAGTTTTTACTGATATTGGGGTTCCTTTGACTTATGAAAATGTTGTCCACGCCACAGGAAATTTCAATGCAAGCAATTGCATTGGGAATGGAGGATTTGGGGCTACTTATAAGGCTGAGATTTCACCTGGAGTCTTAGTGGCAATAAAACGTCTGGCAGTTGGACGATTCCAAGGCGTTCAACAGTTTGATGCAGAGATTAGGACCCTCGGAAGGCATCGTCATTCAAATCTTGTCACTCTGATTGGTTATCATGCTAGTGAGGCAGAAATGTTTCTCATATACAATTATTTACCCGGTGGTAATCTGGAAAAGTTTATCCAGGAGAGGTCTACAAGGGCTGTGGATTGGAGAATTCTTCACAAAATTGCATTGGACATAGCCCGTGCACTTGCATACCTGCACGATCAGTGTGTACCACGCGTCCTTCATCGTGACGTGAAGCCCAGCAACATCCTATTGGATGATGATTTTAATGCTTATCTCTCAGATTTTGGATTGGCCAGACTTTTGGGAACTTCTGAAACTCATGCTACCACCGGTGTGGCAGGAACATTTGGTTATGTTGCCCCTGAATATGCCATGACATGTCGAGTTTCCGATAAAGCCGATGTGTATAGTTATGGTGTAGTGCTCTTAGAGTTACTCTCAGACAAGAAGGCCTTAGATCCTTCGTTTTCTCCCTACGGGAATGGTTTCAATATTGTACAATGGGCTTGCATGCTACTGCGGCAAGGCCGGGCAAAAGAGTTCTTTACTGCTGGGTTATGGGATGCAGGACCTTCAGATGATTTGGTAGAAGTCCTACACTTGGCTGTTGTGTGTACGGTGGATTCTCTCTCCACCAGACCTTCAATGAAACACGTTGTACGACGGCTTAAGCAACTTGAACCGCCATCATGCTA 3431 0.413 MFSTSSASLIKWSFFHKPMSPVLVVQLYFLLWALFMSHSDGMLTDSDKSVLIQFKGSVSDPSGLLSNWNSADSDYCSWSGVFCDSSSRVVALNISGNGGRGNRNSLSCSSFAEFPLYGFGIRRSCESSRGALFGKVSPLISKLTELRVLSLPFNGFEGEIPDEIWGMEKLEVLDLEGNSITGSLPFRFTGLKSLRVLNLGFNKIAGEIPSSLSGLANLEILNLASNNLHGSIPGFIGNLRGAYLLFNLLSGPIPTEIGKNCGKLEHLDLSGNFLVHGIPSSLGNCSQLRTLLLYSNMLENIIPSELGNLQKLEVLDVSRNSISGLIPPELGKCSELTVLVLSNLFNPLPAVNNTERDSSLDEQLVTINEESNYFGGVMPEEITSLPNLRILWAPRANLEGSFPSSWGACDNLEMVNLAQNYLTGGFSRQLSRCKKLHFLDLSSNNLTEELAEELPVPCMTMFDVSGNILSGSIPEFTKNTCPAVPSWNRKLFESDNFSALYISFFASKVHQGTSLPSVGEVDLSIIHNFAHNNFSGVHSMPIASDRLGNQTVYTFLVGENKLTGSFPRILFEKCEGLDALLLNVSYNKLSGQIPADIGGMCRSLKFLDISGNQIAGPVPTGLGEFVSLIGLNLSCNHLQGEIPATIGQIKHLKFLSLAGNNLTGAIPTSVGQLYSLEILDLSSNSLTGDIPMVIENLKNLTALLLNNNKLSGHVPAGLANVTRLSSFNVSFNNLSGSLPSSSNLIKCSSAIGNPLLRSCPVYSLAVPSADQQARADDSSSDTATPPEATSRKGGNGFNSIEIASITSASAIVSVLLALIVLFFYTRKWNPRSRVTGSMRKEVKVFTDIGVPLTYENVVHATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFDAEIRTLGRHRHSNLVTLIGYHASEAEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSPYGNGFNIVQWACMLLRQGRAKEFFTAGLWDAGPSDDLVEVLHLAVVCTVDSLSTRPSMKHVVRRLKQLEPPSC 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02047 1143 Gene3D Ribonuclease Inhibitor 455 770 IPR032675 -
Bva03g02047 1143 Gene3D Ribonuclease Inhibitor 44 241 IPR032675 -
Bva03g02047 1143 ProSitePatterns Protein kinases ATP-binding region signature. 870 892 IPR017441 GO:0005524
Bva03g02047 1143 SMART serkin_6 864 1138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02047 1143 Pfam Leucine Rich Repeat 263 285 IPR001611 GO:0005515
Bva03g02047 1143 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 23 1142 - -
Bva03g02047 1143 Pfam Leucine rich repeat 286 343 IPR001611 GO:0005515
Bva03g02047 1143 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Bva03g02047 1143 Gene3D Transferase(Phosphotransferase) domain 1 940 1139 - -
Bva03g02047 1143 SUPERFAMILY L domain-like 238 741 - -
Bva03g02047 1143 SUPERFAMILY L domain-like 45 344 - -
Bva03g02047 1143 SMART LRR_typ_2 309 333 IPR003591 -
Bva03g02047 1143 SMART LRR_typ_2 191 214 IPR003591 -
Bva03g02047 1143 SMART LRR_typ_2 261 285 IPR003591 -
Bva03g02047 1143 SMART LRR_typ_2 167 190 IPR003591 -
Bva03g02047 1143 SMART LRR_typ_2 215 239 IPR003591 -
Bva03g02047 1143 SMART LRR_typ_2 673 696 IPR003591 -
Bva03g02047 1143 SMART LRR_typ_2 697 720 IPR003591 -
Bva03g02047 1143 Gene3D Ribonuclease Inhibitor 242 454 IPR032675 -
Bva03g02047 1143 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 23 1142 - -
Bva03g02047 1143 Pfam Protein kinase domain 867 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02047 1143 Pfam Leucine Rich repeat 601 615 IPR001611 GO:0005515
Bva03g02047 1143 SUPERFAMILY Protein kinase-like (PK-like) 848 1135 IPR011009 -
Bva03g02047 1143 MobiDBLite consensus disorder prediction 771 792 - -
Bva03g02047 1143 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
Bva03g02047 1143 CDD STKc_IRAK 870 1138 - -
Bva03g02047 1143 Gene3D Phosphorylase Kinase; domain 1 827 939 - -
Bva03g02047 1143 SMART LRR_sd22_2 191 217 - -
Bva03g02047 1143 SMART LRR_sd22_2 673 699 - -
Bva03g02047 1143 SMART LRR_sd22_2 433 452 - -
Bva03g02047 1143 SMART LRR_sd22_2 309 327 - -
Bva03g02047 1143 ProSiteProfiles Protein kinase domain profile. 864 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02047 1143 ProSitePatterns Serine/Threonine protein kinases active-site signature. 984 996 IPR008271 GO:0004672|GO:0006468
Bva03g02047 1143 MobiDBLite consensus disorder prediction 772 792 - -
Bva03g02047 1143 PRINTS Leucine-rich repeat signature 312 325 - -
Bva03g02047 1143 PRINTS Leucine-rich repeat signature 673 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02047 Bva-Chr3 18222787 18226580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02047 19 1143 Receptor kinase-like Gene Family AT3G02130 64.530 0.0 1383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Bva03g02047 Pkinase 2.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02047 - - gmx:100803891 1642.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02047 03 18222787 18226580 Bva03g02047 03 18222787 18226580 ECH