Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02042 ATGGCATCTCAAGATTCTCTGAAAATGCATGAGCTCTGCAAGATTCAGACtcgtctttcttctttgactCTGGTTCCCAAACTCAAGCATTCACTCTCTCTTACTCTCCAGCACTTCCTCCCTCTTGCTGGTAACATTGTTTGGCCTTCCAATTCCCAGAAACACATCATCAAATACACCCCAGGTGATGGCGTTTCTCTTGTTATAGCGGAATCTGATGCTGATTTCTATCTTTTATCAGAAAAATCCCCCATTGAAGCCATAAAGTCTCGTCATTTAGTATCCCACTTGGATTCATCAGACTCAATCTGTTCAGTTATTTCCCCGCAAATCACTCTATTTCCAAACAGAGGATTCTGCAATGGTGTCAGTGCTCACCATGCTGCTCTTGATGGGAAATCTACCATCATTTTCATGAATGCCTGGGCTTATATATGTCAAAATGGAGCAGAATTGCCATCTTTATTGCCGGAGTTAGAGCCATTTTTAAATAGGGAAGTTATCAAAGGCCCAGATGGGCTTGACGTCTTGCTTATAAATCAATGGGAAAAACTCTCAGCTATAATCGATCCCAGTAACTTAAACCAGCGAAGTTTGAAGATTTCCTCGTCAGTCCCTCCTACTCTTGACCAATCACTTCGCGCCACGTTCGAGCTCACCCATTCAGATTTGGAGAAAATTAAGAACAGGATGCTAGCAACGTGGGACAAAGGCCATGAAAGGAACTCAAAACAACAATGGCAAGTTTCTCTTTGGATTAACGGTGGATTGCTTTCTCGGTTGGAGCCTCCAATACCTGACAACTACCTTGGTAATTGTGTTTTTCCACATGCTGTCAATGTACAGCCAGAAGAATTTACTAAGGAAAATGGGCTGATTAGTGTTGCTAAGAAAATTTACAGCAAGGTAAAAATGTTGGACAAGGGAGTGCTTGATGGTATAGATGATCTATTTACTAGATGGATTTCTTTGATCTCAGAGGGGGCTCAGGGCATTAGGGTAGCCGGTTCGACCCGGTTTGGGGTTTATAGGACTGATTTTGGGTGGGGAAGGCCTATCAAGGTGGAGATAACCTCAATAGATAGAGGTTTAACCATGGCATTTGCAGAGAGCAGAGATGGGAATGGTGGTATTGAAATTGGGCTGGTTATGAATAAGCATGAAATGAATGCTTTTGCTACTATATTTCATGAAGGGCTACAGTCTCTTTG 1211 0.4187 MASQDSLKMHELCKIQTRLSSLTLVPKLKHSLSLTLQHFLPLAGNIVWPSNSQKHIIKYTPGDGVSLVIAESDADFYLLSEKSPIEAIKSRHLVSHLDSSDSICSVISPQITLFPNRGFCNGVSAHHAALDGKSTIIFMNAWAYICQNGAELPSLLPELEPFLNREVIKGPDGLDVLLINQWEKLSAIIDPSNLNQRSLKISSSVPPTLDQSLRATFELTHSDLEKIKNRMLATWDKGHERNSKQQWQVSLWINGGLLSRLEPPIPDNYLGNCVFPHAVNVQPEEFTKENGLISVAKKIYSKVKMLDKGVLDGIDDLFTRWISLISEGAQGIRVAGSTRFGVYRTDFGWGRPIKVEITSIDRGLTMAFAESRDGNGGIEIGLVMNKHEMNAFATIFHEGLQSL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02042 403 Pfam Transferase family 19 394 - -
Bva03g02042 403 PANTHER - 257 401 - -
Bva03g02042 403 Gene3D - 209 403 IPR023213 -
Bva03g02042 403 Gene3D - 13 195 IPR023213 -
Bva03g02042 403 PANTHER - 23 244 - -
Bva03g02042 403 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 23 244 - -
Bva03g02042 403 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 257 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02042 Bva-Chr3 18199360 18200775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02042 28 398 Monolignol Biosynthesis Gene Families AT5G48930 23.907 1.32e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02042 - - mnt:21403900 327.791