Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02032 ATGAACAGGAGTCCAAAAGAATCAGATTTTCCTGGAAAACAAGAAGCTCATTCAAGTGATGCCAAGGCAAAAGCTTCCTCTAGCTCGGCACAATGGTTAAGATTGAAAGATCCAAGGATTGTTCGAGTGTCTAGAGGATTTGGAGGTAAAGACAGGCATAGCAAAGTTTGCACAATAAGAGGATTGAGGGACAGAAGGGTGAGACTCTCAGTACCCACAGCTATTCAATTGTATGATCTTCAAGATAGGTTAGGGCTCAGTCAGCCTAGCAAGGTTGTTGATTGGTTACTTAATGCAGCTAAGAATGAAATTGATGAGCTTCCACCATTGCCAATGTCACCAGGGAATTTTAGCCTAAGCCCATATCCTCCTGCTATTACTTCTCATGCATTAAGTGCCTCTCACCCTAACCAAGAAAGGTTCAATATCAATAGTACTATTCATTGGGAAGACCCAAGTGGTAACACTTTATGGAAATCAAAGTCTAAGGAAGTTTCAGGAGAAATGGTTtcccagaaagaaaattggacAACAAGCAGAAGCAGTGAAGAGAATAAAGAAGGAAGCAATGGATCTCATGGTGCACAAGTTTTGCCAAATAATCTGTTGCAAAGAGCAAATCATCACCCTTCCTTGTTGGGCTTGATGAATACTATGCCACTTGGTTACCAATGGGAGAATTCCGGCAACGAATCGAGCCAAACAGATTTACACAGCATCAATGTTGTGCCTTTCCCTAATTCCACATTGTCTTTATCAAGTGGGGCTTCTCAAATTCTGGTGTGTCCTCCAGCTGGGGCAACACAATCTTATTTGCCTTCACACATAGCTGCAATGGACGTTGATCCGCGACAAATCAACCATTATCAAATGTTGAGCTCAAGTTCTCAAAATCTCTTGGCAAATCCTCTCAGTCCTTCTATATATCCAGTGAGCCAATCTGTGAAACCCTTCAGCCTGAGTATGTTACCTACAAAACTTGTCCTTTCTCCCAACCAAAGTGAAAGCCAATCCCATAAAGATAGGGATTTTCCATCCAAGTG 1043 0.4123 MNRSPKESDFPGKQEAHSSDAKAKASSSSAQWLRLKDPRIVRVSRGFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAKNEIDELPPLPMSPGNFSLSPYPPAITSHALSASHPNQERFNINSTIHWEDPSGNTLWKSKSKEVSGEMVSQKENWTTSRSSEENKEGSNGSHGAQVLPNNLLQRANHHPSLLGLMNTMPLGYQWENSGNESSQTDLHSINVVPFPNSTLSLSSGASQILVCPPAGATQSYLPSHIAAMDVDPRQINHYQMLSSSSQNLLANPLSPSIYPVSQSVKPFSLSMLPTKLVLSPNQSESQSHKDRDFPSK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02032 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 342 IPR005333 GO:0003700
Bva03g02032 347 MobiDBLite consensus disorder prediction 1 30 - -
Bva03g02032 347 MobiDBLite consensus disorder prediction 1 20 - -
Bva03g02032 347 MobiDBLite consensus disorder prediction 169 197 - -
Bva03g02032 347 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Bva03g02032 347 MobiDBLite consensus disorder prediction 152 197 - -
Bva03g02032 347 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 342 - -
Bva03g02032 347 Pfam TCP family transcription factor 49 183 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02032 Bva-Chr3 18153143 18155263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02032 32 291 TCP Transcription Factor Family AT3G02150 42.909 2.94e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva03g02032 TCP 3.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02032 - - var:108327895 403.675