Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02018 ATGTGTAAGAAAGACCCAAGTATGAGTAATAGCCCAAAGATACGATTCTCTTGCCTCCTATTCTTCCTTCTTCAACTCCTATTCAGTGTCGGCGTTGACTCTTTCGTATACGAGGCAGTAGAAAATTTAGCAATTAACTGCGGTTCCTCTGGAAATTCAAGTAATTCAGGTGACAGTCGAATCTGGATCGGAGACAACGAATCAGATGGCCACTTTTCCCTTATCGAACAGAAGAAAGATTCAGTTGACGGGATTACAACTCAGTTCGATTCTTCTGTTCCAAAAGTTCCCTACTACACTGCACGTCTATCTCGCTCTCAGTTCAACTACTCGTTTAGGGTTACAGAGGGCCAAAAGTTCATTCGCCTTCACTTTTTCCCATTCTCGTACAACAACCTCGACCGCTCCAACTCCCTTTTCTCTGTCTACGCCGGTCCTTTCACCCTTCTTAAGGACTTCAACGCTTCACTTACCGCAGACAACGACGACGATCCCCGGGATTTTGTCTTTAGAGAATACTGCATCAACGTTGACCAAGGTCAGATGTTAAATATAACCTTCATCCCTAGCCCTGTCCATCCAGATTGTTACGCCTTTATCAATGGGATCGAGGTTGTTTCTATGCCCAGTGATCTTTATTACTCTAAACCTAGCGGTGAAGCGTTAAAGCTGGTTGGTCATGAGGGGAATCCCTACACGATCTACAACAACATGGCTCTGGAGACAGTATACAGAATCAATGTTGGTGGTTCTCAAATCTCCCCAAACGAAGACACGGGCATGTACAGGTATTGGAACGATGATAATTCTTCTTACTTGGAGCAGTTCTTCGACAGTAAAAACAGTACCCTTCAGCTGCCAGTCAATACTTGGCCAAAGAATTACACATTAATTCCCAACTACACTGCTCCAGATGATGTATACATCACTGCTATATCTTACGGGAAGAATCTCAATATAAAGTATAATGTTACTTGGAACTTTAAAGTGGACCCGCAGTTCATTTACATGGTCAGGCTACATTTCTGTGAGATTTCACCATCGATTACAGAAGCAAACCAAAGAGTTTTCTGGATCTTTATTGCAGAGATGCAGGCAGAGGAACGTGCCGATGTGGTTGCCTGGACGGGTCATAATCTTGTTCCCTATTACAAGGACTACGCTGTTATTTTCGACAAATTAGGAAGTTCCAAGGAACAAAACCTTTCAATTAAGTTGCTACCACAGCAAACACAGCGGGCTTACGATGTCATATTGAACGggattgaaattttcaaagtaagtGACACTGAGACGGGCAATCTCGCCGGATCCAACCCTGAACCACGTCTATCTCCCCCTCAGCCAATGGTGCCACCCACTAAGCGACCTAAAAGTTCAAAAGCAAAGACCATAGTTGCCACTATTGCTGGTGCAGGATCAGGCATCATTGTTATATCGATTATATGTTTCCTAATTTTTCGGCGGATAACTCGAGCTTCTGACGACAATGGAAAGTCAAAATGGACTCACATTTCTCTAGTCCCATCTAAATCTAGCAAATCCCATGGCTCATCATTGCCGTCTGATTTGTGTCGTTACTTTTCATTAGCTGAGATTACAGCTGCcacaaataaatttgatgatgTTTTTGTTGTTGGGATTGGAGGTTTTGGTAAGGTGTATAAAGGTTATATTGATGAGGGTACTACACCCGTTGCTATCAAACGGCTCAAACCGGATTCACAACAAGGAGCCCGCGAATTTGCAACTGAGATCGACATGCTCTCTCAGCTTCGCCACCTCCATTTAGTGTCCCTTATTGGTTACTGTAACGATGGCAACGAGATGATCCTCGTCTACGATTTCATGGCTCGAGGGACCCTCCGTGAGCATCTATATAACTCTGATAACCCGCCACTTTCCTGGAAGCAAAGATTGGAGATTTGTCTAGGTGCAGCACGAGGACTACACTATCTTCATACAGGTGCAAACAACAATATTATTCACCGTGATGTCAAGACTACAAACATTCTGTTAGATGAGAAATGGGTGGCAAAAGTTTCGGATTTTGGATTGTCCAAGGTTGGACCAACTGGAATGTCCAAGTCTCACATTAGTACCGTTGTTAAAGGTAGTGTAGGATATTTGGACCCTGAATACTATAAACGTCAACATTTGACTCTTAAGTCTGATGTGTACTCATTTGGTGTGGTGCTGCTTGAGGTATTGTGTGCGAGGCCACCCATACTTCAGGCAGTAGCTAAACCGCAGGCAAGCTTGGTAGAGTGGGTCCGTAAATGCTACAAAAATGGGGAGATTGATCGAACGGttgatcattttttaaaaggaacTATTGCACCTCAgtgtttaaataattatgttgaTATGGCTCTCAAATGTCTGCTTGAAGATGGAAATGAACGGCCATCAATGAATGATGTAGTGTGGGGCCTAGAGTTTACAATGCAACTGCAGGAGAGCATGGAGGGTACTGTGCTTGGTGGGAGTACTAAGGATATGAAAAAGGCCCTCTTAACAAATACTGTGATTGTTGATGTAGAAAGTGATGTGTTGTTCACCAGTACTGATGAATCGTCAACTATGTCTCAGGCGAGCAAGATGACTACAACCAGTAGTAAGAGTCAACCTTTAACTGCTGGGATGGTGTTCTCAGAACTTCAGGACCCTACCGCGCGATA 2681 0.4267 MLSQLRHLHLVSLIGYCNDGNEMILVYDFMARGTLREHLYNSDNPPLSWKQRLEICLGAARGLHYLHTGANNNIIHRDVKTTNILLDEKWVAKVSDFGLSKVGPTGMSKSHISTVVKGSVGYLDPEYYKRQHLTLKSDVYSFGVVLLEVLCARPPILQAVAKPQASLVEWVRKCYKNGEIDRTVDHFLKGTIAPQCLNNYVDMALKCLLEDGNERPSMNDVVWGLEFTMQLQESMEGTVLGGSTKDMKKALLTNTVIVDVESDVLFTSTDESSTMSQASKMTTTSSKSQPLTAGMVFSELQDPTAR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02018 306 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 1 275 - -
Bva03g02018 306 PANTHER OS07G0166700 PROTEIN 1 275 IPR045272 GO:0004714|GO:0006468
Bva03g02018 306 Pfam Protein tyrosine and serine/threonine kinase 1 222 IPR001245 GO:0004672|GO:0006468
Bva03g02018 306 PIRSF TyrPK_CSF1-R 18 159 - -
Bva03g02018 306 PIRSF TyrPK_CSF1-R 182 297 - -
Bva03g02018 306 SUPERFAMILY Protein kinase-like (PK-like) 1 227 IPR011009 -
Bva03g02018 306 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02018 306 Gene3D Transferase(Phosphotransferase) domain 1 31 243 - -
Bva03g02018 306 SMART serkin_6 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02018 306 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Bva03g02018 306 MobiDBLite consensus disorder prediction 269 306 - -
Bva03g02018 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Bva03g02018 306 MobiDBLite consensus disorder prediction 269 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02018 Bva-Chr3 18057219 18060197 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02018 1 306 Receptor kinase-like Gene Family AT3G51550 58.599 5.97e-119 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva03g02018 PK_Tyr_Ser-Thr 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02018 - - qsu:111986360 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02018 03 18057219 18060197 Bva03g02018 03 18057219 18060197 ECH