Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02016 ATGAAAGTAAATCTTCCTCTtccaagaaaaacaaaaacagaaatcaTCTTGCAGTCGCAATATTTTCCATTTGCAGACACTACGTTATCAGAAAGAACGGTGAGCTTAGCCGCAAGTATGAGTAATAGCCCAAAGATTCGATCCTCTTGCCTCCTATTCTTGCTTCTTCAACACCTATTCAGCGTCGGCGTCAACTCTTTCGAATACGATGCCGTAGAAAATTTGGCGATCAACTGCGGTTCCTCTGGACAATCAATCGGCGGTTTAAATGATTCTCGAATCTGGATCGGAGACAAGGACTCAAATGACCAGTTTTCCCTTATTGAAGATGGTAAAGATTCAGTTGACGGGAATACAACTCAGTTCGATTCTTCTGTTCCACAAGTTCCCTACTACACTGCACGTTTTTCTCGCTCGGAATTCAACTACAGCTTTAAGGTCACAGAGGGCCCAAAGTTCATTCGTCTTcactttttcccattttcctCCGGCAATTTCGACCGCTCCAACTCCCTTTTCTCTGTCTACGCCGGTCGTTTCACCCTTCTTAATGACTTCAACGCTTCACATACCGCAGACAACGACGACGATCCCCTGTATTTTGTCTCAAGAGAATACTGCATCAACGTTGACCATGGTCAGAGGTTAACTATAGCCTTCGTCCCTAGCCACGCCCATCCAGATTTTTACGCCTTTATCAATGGGATCGAGGTCGTTTCTATGCCCACAAATCTTTATTACCCTAAACCTGGTACCCAAGGGATAAAGCTGGTTGGTTATGACAATCGCTTCGTGATGGAAAGCAACATGGCTCTGCAGACAATGTACAGAATCAATGCTGGTGGGTCTCAAATCCCTTCAAACAGAGACACTGGTATGTACAGGTATTGGGATGATGATTATTCTTACTTGGTAAAGGCCTACAATATTAGCGTGCCGGTTAATTATTGGCCAAAGAATTTCACACTAATTCCCAACTACACTGCACCATTTGAACTATATCTCACTGCTCGCAGTTACGGGAGGGATTCCACTTCAAAGTATAATGTAACATGGAACTTTAAAGTGGACCCGCTGTTTATTTACATGGTGAGGCTACATTTCTGTGAGATTGAATTAAACATTACAGAAGGAAACGAAAGAGTTTTTCAGATCTTTATTGATGGCATGATGGCAGAGGATCGTGCCGACGTGGTCATGTGGACGAAGCATAATCTTGTCCCCATCTATAAGGACTATATTGTTAAAATAGCAGGAAGCTTGAAGCAACTAAACCTTTCAATTAAGTTGCAACCAATACGAACAATGTTTGCTGATGATGTGATATTAAATGGGCTcgaaattttcaaagtaagtGACATTGGTACAGGCAATCTCGCCGGACCCAACCCCGAACAACGTCTATCTCCCCCTCAGTCATTGGTTCCACCGGCTAAACCACCTAAAAGCTCAAAAGGAAAGACCATAGTTGCCACTGTCGCAGGTGCAGGATCGGGCCTCATTGTCATATCCTTCATATGTTTCCTAATTTATAGGCGAACAACTCGAGGTTCTGCCAACAATAGAGATTCAAAGTGGAGACCCATTTCTCTAGTCCCCTCTAAATCAAGCAAGCCCCACGGCACATCATTGCCATCCGATTTATGTCGTTACTTTTCGTTTGCTGAGATTACAGCCGCCACAAATAACTTCAATGATGTTTTTGTTATTGGCATTGGAGGGTTTGGTAAGGTGTACAAAGGGTACACTGATGATAGCACCATCCCTGTTGCCATTAAAAGGCTCAAACCAGGTTCACAACAAGGAGCTCACGAATTTGAAACTGAGATCGCGATGCTCTCTCAGCTTCGACACCTCCATTTGGTGTCCCTCATTGGTTATTGTAACGATGGCAACGAGATGATCCTCGTCTACGATTTCTTGGCTCGAGGGACCCTTCGTGAGCATCTATATAACTCTGATAACCCGCCACTTTCCTGGAAGCAGAGACTGGAGATTTGTTTAGGTGCAGCACGAGGATTACACTATCTTCATACAGGTGCAAAACACAACATCATTCACCGTGATGTCAAAACTACAAACATTTTATTAGATGAGAAATGGGTGGCAAAAGTTTCGGATTTTGGATTGTCCAAGGTTGGACCCACGGGGATGTCCAAGTCTCACATAAGTACTGTTGTTAAAGGTAGTGTAGGATATTTGGACCCTGAATACTATAAACGTCAACATTTGACTCTTAAGTCTGATGTGTACTCATTTGGTGTGGTGTTGCTCGAGGTATTGTGTGCAAGGCCACCCATTCTTCAGGCAGTAGAGAAACAGCAGGCAAGCTTAGTGGAGTGGGTCCGTAAATGCCATACAAATGGGGAGATTGATCGAACGGTTGAtccttttttaaaaggaaCTATAACGCCTCagtgtttaaataattttgttaatatggCTCTCAAATGTCTGCTTGAAGATGGAAATGAACGGCCATCAATGAATGATGTAGTGTGGGGCCTAGAGTTTACGATGCAACTGCAGGAGAGCACGGAGGGTACTATGCTTGGTTGGAGCACTGAGGATGAGAAAAGGGCCTTCTCAACAAATACTGCGAGTGTTGATGTTGATAGTGATGTGTTGTTCACCGGTACTGATGAATCGTCAACTAGGTCTCAGGCGAGCAAGATGACTACAACCAGTAGTGAGGACCAAACGTTAGTTCGTGGGATGGTGTTCTCAGAGCTTCAGGTACCGCGAAATAATTGTTCCAAAATTATATCGTA 2771 0.4251 MSNSPKIRSSCLLFLLLQHLFSVGVNSFEYDAVENLAINCGSSGQSIGGLNDSRIWIGDKDSNDQFSLIEDGKDSVDGNTTQFDSSVPQVPYYTARFSRSEFNYSFKVTEGPKFIRLHFFPFSSGNFDRSNSLFSVYAGRFTLLNDFNASHTADNDDDPLYFVSREYCINVDHGQRLTIAFVPSHAHPDFYAFINGIEVVSMPTNLYYPKPGTQGIKLVGYDNRFVMESNMALQTMYRINAGGSQIPSNRDTGMYRYWDDDYSYLVKAYNISVPVNYWPKNFTLIPNYTAPFELYLTARSYGRDSTSKYNVTWNFKVDPLFIYMVRLHFCEIELNITEGNERVFQIFIDGMMAEDRADVVMWTKHNLVPIYKDYIVKIAGSLKQLNLSIKLQPIRTMFADDVILNGLEIFKVSDIGTGNLAGPNPEQRLSPPQSLVPPAKPPKSSKGKTIVATVAGAGSGLIVISFICFLIYRRTTRGSANNRDSKWRPISLVPSKSSKPHGTSLPSDLCRYFSFAEITAATNNFNDVFVIGIGGFGKVYKGYTDDSTIPVAIKRLKPGSQQGAHEFETEIAMLSQLRHLHLVSLIGYCNDGNEMILVYDFLARGTLREHLYNSDNPPLSWKQRLEICLGAARGLHYLHTGAKHNIIHRDVKTTNILLDEKWVAKVSDFGLSKVGPTGMSKSHISTVVKGSVGYLDPEYYKRQHLTLKSDVYSFGVVLLEVLCARPPILQAVEKQQASLVEWVRKCHTNGEIDRTVDPFLKGTITPQCLNNFVNMALKCLLEDGNERPSMNDVVWGLEFTMQLQESTEGTMLGWSTEDEKRAFSTNTASVDVDSDVLFTGTDESSTRSQASKMTTTSSEDQTLVRGMVFSELQVPRNNCSKIIS 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02016 884 ProSiteProfiles Protein kinase domain profile. 525 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02016 884 SUPERFAMILY Protein kinase-like (PK-like) 509 800 IPR011009 -
Bva03g02016 884 Pfam Protein tyrosine and serine/threonine kinase 531 794 IPR001245 GO:0004672|GO:0006468
Bva03g02016 884 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
Bva03g02016 884 MobiDBLite consensus disorder prediction 479 503 - -
Bva03g02016 884 Gene3D Transferase(Phosphotransferase) domain 1 602 816 - -
Bva03g02016 884 CDD STKc_IRAK 531 794 - -
Bva03g02016 884 Gene3D - 35 203 - -
Bva03g02016 884 Gene3D - 231 413 - -
Bva03g02016 884 MobiDBLite consensus disorder prediction 839 859 - -
Bva03g02016 884 MobiDBLite consensus disorder prediction 421 446 - -
Bva03g02016 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Bva03g02016 884 PANTHER OS07G0166700 PROTEIN 21 811 IPR045272 GO:0004714|GO:0006468
Bva03g02016 884 Gene3D Phosphorylase Kinase; domain 1 493 601 - -
Bva03g02016 884 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 21 811 - -
Bva03g02016 884 SMART serkin_6 525 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02016 884 Pfam Malectin-like domain 38 412 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02016 Bva-Chr3 18051151 18054154 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02016 25 876 Receptor kinase-like Gene Family AT3G51550 47.059 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva03g02016 Malectin_like 6e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02016 - - qsu:112029792 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02016 03 18051151 18054154 Bva03g02016 03 18051151 18054154 ECH