Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02013 ATGAGCTTCACCGTACTCTATCTCTGTTTGTCCCTCTTCTATCTTTCTGGCTATGCTTACAATCCAGTTGATGTCTTTAGACTCAGTTGTGGCAGCTCAAACAACTCCACCGATAATGGTAACCGGACATGGACAGGAGATATCCACTCAGATTTCTTGTTACCCATTGAGAGCCAACAAGAAAAGGAATCAGTTATTGCAGCTTCAACAGTTAGACAGCCTTCAGAGTACGACGTTGTCCCCTACATCACAGCTCGTCTCTCTTACTCTAACTTTACCTATTCATTCCCTGTCACTCCGGGCCAAAAATTCATTCGCCTATACTTCTACCCCACTTCCTATGTGCCAGATTTCGATCGCTCTAAAGCCTTATTCTCAGTCACATCTGGTACCTTTACCCTTCTTGAGGATTTCAATGCTTCACTCACTGCTGATGCTGATAATGATCCTCTTAATAGCGTCTTCAGAGAATATATCATCAACGTAGATGGTCAGAGGCTCAACTTAACTTTCAGTCCAAGCACAATCCAACGAGATTTGTATGCTTTCATCAATGGAATCGAGATTCTGTCCATGCCCACTAATCTTTATTACATCGACTCTCAGAACCCAGCTGGGTTGAAATCAGTAGGATCTAATTCCTTTTATAGCATCACAAACAGCACCGCCCTCGAAACAGTGTATCGAATAAATGCCGGTGGAAGTGATATCTCACCTTCACGAGATACAGGTTTGTTCAGGTCCTGGGAAGGCGACAGTAATTATAGAGAAGCGCCAAGTGCAATGGATAAactatatgtttttattggtACGGAGTTAAGCTTCACTCAGGTTGCAAATTACACGGCACCGGATCCAGTTTACATAACAGCACGGTCTATGGGAGAGAATGCCACTTTCAACAAAATCTCTAATCTCACCTGGGAATTCTCTGTTGGTTCTGGCTTTATCTACATGCTTAGGCTTTCACTTTTcAATGATAGTAAACTTGCCGGACCCAATCCTGACCTTCCACCCATGTATCAGCAACCTGTTCTGAACTCGAAGGAACGCAGGACAAAGATTATAATCGCCACGGTCGCCGGTGTAGTTTCTTGGTTCACTTTGCTCTTCCTTCTTGTTTACTTCGTCAATAAACAAGGGAAGAAACTCAAGGATACAAAATCTGGCGAGGGCTCATCATCTATTCCCTCCTATACTTGCCGTCATTTCTCAATAGATGAAATCAGAGTCGCTACGGAAAACTTCAATGAACAATTCATCATCGGAAAAGGAGGGTTTGGTGACGTGTACAAAGGGTACATCGACGATGCCACCACGCCTGTTGCCATCAAAAGGTTGAAACAAGGATCTCAACAAGGGGCCCAAGAGTTCATGACAGAGATTGAGATGCTCTCACAACTCGTCCATCGAAATTTAGTTTCTCTAATTGGTTATTGCAACGACGAGAATGAAATGATCCTGGTCTATGAATTCGTGAATCGAGGGACTCTTCGTGATCATCTTTACAACACTCATAACCAGTGTTGTTGGAGGTATTGTGTGGGAGGCCTCCTTTGCTACGCTCAGTGGAGAAGCAACAAGCATGCTTA 1592 0.4328 MSFTVLYLCLSLFYLSGYAYNPVDVFRLSCGSSNNSTDNGNRTWTGDIHSDFLLPIESQQEKESVIAASTVRQPSEYDVVPYITARLSYSNFTYSFPVTPGQKFIRLYFYPTSYVPDFDRSKALFSVTSGTFTLLEDFNASLTADADNDPLNSVFREYIINVDGQRLNLTFSPSTIQRDLYAFINGIEILSMPTNLYYIDSQNPAGLKSVGSNSFYSITNSTALETVYRINAGGSDISPSRDTGLFRSWEGDSNYREAPSAMDKLYVFIGTELSFTQVANYTAPDPVYITARSMGENATFNKISNLTWEFSVGSGFIYMLRLSLFNDSKLAGPNPDLPPMYQQPVLNSKERRTKIIIATVAGVVSWFTLLFLLVYFVNKQGKKLKDTKSGEGSSSIPSYTCRHFSIDEIRVATENFNEQFIIGKGGFGDVYKGYIDDATTPVAIKRLKQGSQQGAQEFMTEIEMLSQLVHRNLVSLIGYCNDENEMILVYEFVNRGTLRDHLYNTHNQCCWRYCVGGLLCYAQWRSNKHA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02013 530 PANTHER GPCR KINASE, MITOGEN-ACTIVATED PROTEIN (MAP) KINASE KINASE KINASE 7-RELATED 15 325 - -
Bva03g02013 530 Gene3D Phosphorylase Kinase; domain 1 400 492 - -
Bva03g02013 530 Pfam Malectin-like domain 28 321 IPR024788 -
Bva03g02013 530 Pfam Protein tyrosine and serine/threonine kinase 421 507 IPR001245 GO:0004672|GO:0006468
Bva03g02013 530 PANTHER OS07G0166700 PROTEIN 341 512 IPR045272 GO:0004714|GO:0006468
Bva03g02013 530 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Bva03g02013 530 PANTHER GPCR KINASE, MITOGEN-ACTIVATED PROTEIN (MAP) KINASE KINASE KINASE 7-RELATED 341 512 - -
Bva03g02013 530 PANTHER OS07G0166700 PROTEIN 15 325 IPR045272 GO:0004714|GO:0006468
Bva03g02013 530 Gene3D - 222 329 - -
Bva03g02013 530 Gene3D - 24 193 - -
Bva03g02013 530 SUPERFAMILY Protein kinase-like (PK-like) 391 512 IPR011009 -
Bva03g02013 530 ProSiteProfiles Protein kinase domain profile. 416 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02013 Bva-Chr3 18023650 18025759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02013 370 517 Receptor kinase-like Gene Family AT3G51550 50.980 1.37e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva03g02013 Malectin_like 2.4e-23 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02013 - - cit:112498596 359.377