Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02009 ATGATGAACTTGAGACTCTtttgcttattatttttagtccTTCAAGGGCAGTTCAGCTTCTACGTTAACTCTCTTTCTCCTCCGGACGATTGTGCAGTTAACTGTGGCTCCATGGACAAATCAAATAATCGTTCCTGGATTGCGGACGTGAATTCAGAACTATTCTCTCTTGTTGAACCACCAAATCAACAACATTCAGATATCGCCTCCACAGCTCAGCCCTATCTAAAAATACCTTATGGCACCGCTCGCCTCTCTCACTCCGAATTCACCTACTCCTTTGCAGTCACCGGCGGCGAAAAGTGCGTTCGCCTTTACTTTTACCCGGCTTCCTATCATAACCTCAACCGCTCAGACTCCTTCTTCTCTGTTTCATCTGGCGGAAACACTCCTCTTCCGGACTTCAATGCTTCATACGCAGCTGATAACGATAGCGATCCCGAGAAAACAGTCTCAGAGGAGTTCTGCGTCAACGTTGACTCAGGTCAGAGGCTAAATGTAACCTTCACTCCTTGCCAAACCCACACAGGTGCGTATGCTTTTGTCAATGGTATCCAGGTTGTGTCTGCGGTCTCCGATCAACGTTCTTTGTGTTCATGTTGGTCAACCAAGAGGAAGACGAGACTAATCGTCATCACCATGGTCTCACTTTCTGGATTGGTTTTGATGTTTGCCATTGGTTTCTTGATTCTCAAACAAAGGATCAAGAAAGCTAGGGTAAAGGCGCATATGGACAATATGGACCCTGAGATGCTGTCATCACACAAAATTAAGTCATCCCTGCGCTCTGCTCCCTGCCGTTATTTTTCAATCGATGAGATCAGAATCGCCACCGTCAATTTTGATGATGTATTCCTTATTGGGGTTGGAGGATTTGGCAAAGTCTACAAGGGGTTCATTGATGAAGGAACCACGCCCGTTGCCATCAAACGCTCTAATCCAAAACTTGGACAAGGACTCTCTGAGTTTGAGACGGAGATAGAGATGCTGTCTCAACTTTCTCACCCACACTTGGTCTCCCTCATTGGTTACTGCAACGATGACGATGAGATGATACTTGTCTATGATTTCATGGCTAATGGAACCCTTCGTGATCATCTTTATGGCTCCACAAATCCACCACTTTCATGGAAGCAAAGGTTGGAGAGTTGCATAGGTGCAGCTCGAGGGCTCGTGCATCTTCATAGAGGCGGGAAGAACAATATCATTCATCGTGATGTGAAAACTagtaatattttgttagatGAACAATGGGTGACTAAGGTTTCAGATTTTGGATTGTCCAAAATAGGACCCAGTGGGGAATCCAAGACCCATATTACTACATTGGTGAGGGGTAGCCAAGGGTATCTGGACCCTCAATACTACAAGAGTCAACATTTGACTGAGAAGTCTGACGTGTACTCTTTTGGTGTGGTGCTCCTTGAGGTATTGTGTGGTAGGCCACCTTTGCTTCGTGCAATGGAGAAGACGAAATCACAGGGAAGCCTAGTGGAGTGGGCCCGGAAATGCCACATTGATGGAGTCATTGATCAAATAGTTGATCCTGTTTTGAAAGGAAACATTGCCACGGAATGTTTAAGTAAGTTCATTGATGTGGctttaaaatgtttaacaCACGATAGACATCAACGGCCACCGATGAGCGATGTGGTAGAAGGTCTTGAATATGCTTTGCAGCTACAAGAGGGTAGAGAGGATACGAAGATTAGCAGTTGTCACAACGAGGGAACTACTGACCAGAGTTTATG 1751 0.4449 MMNLRLFCLLFLVLQGQFSFYVNSLSPPDDCAVNCGSMDKSNNRSWIADVNSELFSLVEPPNQQHSDIASTAQPYLKIPYGTARLSHSEFTYSFAVTGGEKCVRLYFYPASYHNLNRSDSFFSVSSGGNTPLPDFNASYAADNDSDPEKTVSEEFCVNVDSGQRLNVTFTPCQTHTGAYAFVNGIQVVSAVSDQRSLCSCWSTKRKTRLIVITMVSLSGLVLMFAIGFLILKQRIKKARVKAHMDNMDPEMLSSHKIKSSLRSAPCRYFSIDEIRIATVNFDDVFLIGVGGFGKVYKGFIDEGTTPVAIKRSNPKLGQGLSEFETEIEMLSQLSHPHLVSLIGYCNDDDEMILVYDFMANGTLRDHLYGSTNPPLSWKQRLESCIGAARGLVHLHRGGKNNIIHRDVKTSNILLDEQWVTKVSDFGLSKIGPSGESKTHITTLVRGSQGYLDPQYYKSQHLTEKSDVYSFGVVLLEVLCGRPPLLRAMEKTKSQGSLVEWARKCHIDGVIDQIVDPVLKGNIATECLSKFIDVALKCLTHDRHQRPPMSDVVEGLEYALQLQEGREDTKISSCHNEGTTDQSL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02009 583 SMART serkin_6 281 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02009 583 CDD STKc_IRAK 287 556 - -
Bva03g02009 583 SUPERFAMILY Protein kinase-like (PK-like) 265 553 IPR011009 -
Bva03g02009 583 ProSiteProfiles Protein kinase domain profile. 281 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02009 583 Pfam Protein kinase domain 286 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02009 583 Gene3D Transferase(Phosphotransferase) domain 1 358 578 - -
Bva03g02009 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Bva03g02009 583 Gene3D - 31 192 - -
Bva03g02009 583 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 204 567 - -
Bva03g02009 583 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 22 194 - -
Bva03g02009 583 PANTHER OS07G0166700 PROTEIN 204 567 IPR045272 GO:0004714|GO:0006468
Bva03g02009 583 PANTHER OS07G0166700 PROTEIN 22 194 IPR045272 GO:0004714|GO:0006468
Bva03g02009 583 Pfam Malectin-like domain 35 190 IPR024788 -
Bva03g02009 583 ProSitePatterns Protein kinases ATP-binding region signature. 287 310 IPR017441 GO:0005524
Bva03g02009 583 Gene3D Phosphorylase Kinase; domain 1 242 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02009 Bva-Chr3 18000437 18002357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02009 259 573 Receptor kinase-like Gene Family AT3G51550 62.222 2.62e-130 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva03g02009 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02009 - - adu:107486605 551.206