Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01997 ATGAGAATTCTTACTGAATGCTTTGGTTTCTCTAATTCAAAGCATAAATACTCTTCCCAAATAGAAGAGCTATGCCATCGTTTTTCTTTAGCTCAACTCcaaaaatcaacaaacaacTTTGACGAAAACCGAATAATTGGAAGAGGAGGCTCCAGTAAAGTATACAAGGGTTGTATTTACATCCAAGGTGTTGCTAAGGAAGTTGCAATAAAGCGGGCCAACACAAATCTGATctattcattcaattttgaaGTTGAGTTGCTGTGCCAGCTTCACCACACAAATCTGATCTCGCTCATAGGATTTTGCAATGAGAAAGATGAGGAGATTATTGTCTATGAATACATGCCTAATAAATCACTCAATGACCACCTTGTTTTGTGTGACAAAACAAAGGAATCACTTCCATGGAAGAGAAGACTTGAAATTTGCATAGGAGCAGCACGTGGATTGCACTACCTTCACTCAGGAGCAAAGCGTACAATTTTACACCGTGTTGTGAAGCCCGCCAACATTCTTTTAGATCAGAATTGGATACCAAAACTCTCAGATTTTAGGACTTCCTTGAAAGGGCCGCATTCCATGTCAAAACCAAGACCAATACCAGTAAGCCATATAGTTGGGACTATTGGATACATGTCACCTGAGTGTGTCAGCCTTACTAACTTGACAGAAAAATGTGATGTCTATTCCTTTGGTATGGTTCTGATGGTAGTGGTATGTGCAGATAGGCTATGTACAATTTTTGAGAAGTGCCGGAACGTAGAAGAGGGAGGGAGTGAGAGCGAGCATTTCCAAGGGTCTTATGAAAATTTAGCCACGCAAGTAGATGAAGACAAGAGTAGGGGTGTGAATGGGACTATGTGTGAGCATTTACAAGGTTCTTTCCAAAATCTAGCCTCGCAGATACATGTAGGCGAGAGTAGTAGTGAGAGTGAACATTTACAAGTGTCTTACGAAAATTTAGCCTCGCAGTCAGATCTAGACGAGAGTGAGATTATAAGTGAGCATATACTAGGACCTTTTCACATAAATTTAGCCTCGTGGGTATATGATATTGTACAAAACGGAAAGGCTGATGAGATTGTGGATCCATTTCTGATGGGGAAAATTGAACCAGAGTGTTGGAAAATGTTCATGAATATTGCAGAAAGATGCTTGCTTTTGGAGCCAAATGAAAGGCCAACAATGGGCGAGGTGGAGGTTGAACTTGAGCATGCTCTAGCATTGCAGGAAGAGGCAGATCAGACCAACCCCAGTGGTGATTATAGCTTATTTTCCACTATGACTACTCCTCAACCTGAGCTTGCCAACTA 1316 0.4027 MRILTECFGFSNSKHKYSSQIEELCHRFSLAQLQKSTNNFDENRIIGRGGSSKVYKGCIYIQGVAKEVAIKRANTNLIYSFNFEVELLCQLHHTNLISLIGFCNEKDEEIIVYEYMPNKSLNDHLVLCDKTKESLPWKRRLEICIGAARGLHYLHSGAKRTILHRVVKPANILLDQNWIPKLSDFRTSLKGPHSMSKPRPIPVSHIVGTIGYMSPECVSLTNLTEKCDVYSFGMVLMVVVCADRLCTIFEKCRNVEEGGSESEHFQGSYENLATQVDEDKSRGVNGTMCEHLQGSFQNLASQIHVGESSSESEHLQVSYENLASQSDLDESEIISEHILGPFHINLASWVYDIVQNGKADEIVDPFLMGKIEPECWKMFMNIAERCLLLEPNERPTMGEVEVELEHALALQEEADQTNPSGDYSLFSTMTTPQPELAN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01997 438 PANTHER TYROSINE KINASE FAMILY PROTEIN 357 427 - -
Bva03g01997 438 PANTHER TYROSINE KINASE FAMILY PROTEIN 11 257 - -
Bva03g01997 438 ProSitePatterns Protein kinases ATP-binding region signature. 46 71 IPR017441 GO:0005524
Bva03g01997 438 Pfam Protein kinase domain 41 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01997 438 MobiDBLite consensus disorder prediction 411 438 - -
Bva03g01997 438 PANTHER OS07G0166700 PROTEIN 11 257 IPR045272 GO:0004714|GO:0006468
Bva03g01997 438 ProSiteProfiles Protein kinase domain profile. 40 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01997 438 SUPERFAMILY Protein kinase-like (PK-like) 27 402 IPR011009 -
Bva03g01997 438 PANTHER OS07G0166700 PROTEIN 357 427 IPR045272 GO:0004714|GO:0006468
Bva03g01997 438 MobiDBLite consensus disorder prediction 413 438 - -
Bva03g01997 438 Gene3D Transferase(Phosphotransferase) domain 1 116 312 - -
Bva03g01997 438 Gene3D Transferase(Phosphotransferase) domain 1 331 426 - -
Bva03g01997 438 Gene3D Phosphorylase Kinase; domain 1 7 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01997 Bva-Chr3 17938407 17940223 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01997 9 241 Receptor kinase-like Gene Family AT5G38990 50.420 1.84e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bva03g01997 Pkinase 2.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01997 - - lja:Lj0g3v0196439.1 303.138