Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01996 ATGGGAATTCTTCCTAAATGCTTTGGATTCTCTGGTTCAAAGCATACAAGTTCATCTCATCATATGAATAAATACTCAACCCAAATAGAAGAGCTATGCCATCGCTTTTCTCTAGCTCAACTCCAAAAATCAACCAATAACTTCAATGATAGCCGAAAAATTGGAAGGGGAGGCTTTGGTTACGTATACAAGGCCTGTATTTGCATACAAGGTATTGCTAAGGAAATTGCAATAAAGCGATTTTCAAGGGATTCTATACAAGCTTTCTCTGAGttccaaaatgaaattgagCTTCTCTGCCAGCTTCGCCACCCAAATTTAGTATCGCTGATAGGATTTTGCTTTGAAAAagatgagaaaattattgtttatgaATACATGGCCAACGGAAGTCTCCATGATCACCTGGTTAACAAAATAACGGTGCCACTTCCATGGAAGAGAAGGGTTGAAATTTGCATAGGAGCAGCACGTGGATTGCACTACCTTCACTCAGGAACAAAGCGTATCATTTTTCATCGTGATgtgaaacaaacaaatattcttttagatCAGAATTGGATACCTAAACTTTCAGATTTTGGCCTTTCTCTGATAGGGCCACTTTCTAtgtcaaaaccaaaaccaacaaCTTTAGACAGGATTATAGGTACTTATGGATACATGGCCCCGGAATATTACTTCAATGGTACGTTTTCAGAAAAATGTGATGTCTTTTCCTTTGGTATGGTTCTGCTAGTAGTGGTATGTGCAAAAGACGCGCAAAAGATTGTACCTGTAGATGAGGATGGGAGTGAGAGCGAGAATTCTTACGAAAATTTAGCCTCGAAGGTATATAATCTTGTACACGAGGGAATGGCGGATGAGATTGTAGATCCATTTCTGATGGGGAAAATTGCACCCAAGTGTTGGAAAGTATTCATGGATATTGCAGAAAGATGCTTGCTTGATGAGCCAAATGAAAGGCCGGCAATGGGTGAGGTGGAGGTGGAACTTGAGCATGCTCTGGCGTTGCAGGAAGAGGCAGATCAGACCAATCCGAGTGGTGATTATAGCTTGTTATCCACTGTGGCTGCTCCTCAACCAGAGAATGGCAACCAGAACTTAAGATTTTCAGCAGATAAGAACAACAATGGTGCAGACACAACCTG 1151 0.3866 MGILPKCFGFSGSKHTSSSHHMNKYSTQIEELCHRFSLAQLQKSTNNFNDSRKIGRGGFGYVYKACICIQGIAKEIAIKRFSRDSIQAFSEFQNEIELLCQLRHPNLVSLIGFCFEKDEKIIVYEYMANGSLHDHLVNKITVPLPWKRRVEICIGAARGLHYLHSGTKRIIFHRDVKQTNILLDQNWIPKLSDFGLSLIGPLSMSKPKPTTLDRIIGTYGYMAPEYYFNGTFSEKCDVFSFGMVLLVVVCAKDAQKIVPVDEDGSESENSYENLASKVYNLVHEGMADEIVDPFLMGKIAPKCWKVFMDIAERCLLDEPNERPAMGEVEVELEHALALQEEADQTNPSGDYSLLSTVAAPQPENGNQNLRFSADKNNNGADTT 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01996 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bva03g01996 383 ProSitePatterns Protein kinases ATP-binding region signature. 54 79 IPR017441 GO:0005524
Bva03g01996 383 Gene3D Phosphorylase Kinase; domain 1 10 126 - -
Bva03g01996 383 PANTHER OS07G0166700 PROTEIN 25 355 IPR045272 GO:0004714|GO:0006468
Bva03g01996 383 Pfam Protein tyrosine and serine/threonine kinase 51 330 IPR001245 GO:0004672|GO:0006468
Bva03g01996 383 ProSiteProfiles Protein kinase domain profile. 48 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01996 383 SUPERFAMILY Protein kinase-like (PK-like) 32 330 IPR011009 -
Bva03g01996 383 MobiDBLite consensus disorder prediction 339 383 - -
Bva03g01996 383 Gene3D Transferase(Phosphotransferase) domain 1 127 354 - -
Bva03g01996 383 PANTHER TYROSINE KINASE FAMILY PROTEIN 25 355 - -
Bva03g01996 383 SMART serkin_6 48 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01996 383 MobiDBLite consensus disorder prediction 341 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01996 Bva-Chr3 17932710 17934150 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01996 2 344 Receptor kinase-like Gene Family AT3G51550 46.377 9.93e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva03g01996 PK_Tyr_Ser-Thr 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01996 - - adu:107486597 362.459