Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01992 ATGGCTGCATCCGATGCACGAGCGCAGTCGTTCGGTCAGACCGAGATTAACTGGGACAAGCTAGATAAAACTAAGTTTTATGTTGTAGGGGCTGGAATCTTTACTGGTATCACAGTGGCTCTCTACCCAGTTTCTGTTGTGAAAACTAGACTGCAGGTTGCTACAAAAGATACTGTAGAGAGAAATGCATTTTCTGTCATGAAAGGGTTACTTAGAACAGATGGTGTTCCTGGTCTGTACAGAGGATTTGGTACTGTCATCACTGGTGCAATTCCTGCTAGAGTTATATTTCTCACTTTTCTAGAGACCACAAAAGTGTCTGCCTTCAGACTCCTCGAACCATTTAGGCTATCTGAAACTACCCAAGCAGCCATAGCAAATGGAGTTGCAGGCATGACATCATCACTTCTTGCTCAATCTGTCTTTGTCCCAATGGATGTGGTAAGCCAAAAATTAATGGTGCAAGGATATGCGGGTCATGTCAAGTATAGTGGAGGCTTGGATGTTGCTCGTAAGGTTATAAGATCTGATGGTATCAGGGGTTTGTATAGAGGGTTTGGTCTATCTGTTATGACTTATTCACCGTCTAGTGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGCTTCATTTGGAGATTCTTGGAAAATGGTACTACAAATGAGGAAGCAATTCCTAGTGTGCAGAAAATTATGTTAGTTCAGGCTGCTGGAGGAATTATTGCAGGTGCAACTGCATCCTGCTTTACAACCCCATTGGATACCATCAAGACACGATTGCAGGTGTCAGGACATGAAAAGAGAAGCTCTATGAAACAAGTTGTTCAAGACTTGATCAAGGAGGATGGCTGGAAAGGCTTTTATAAAGGTTTCGGTCCAAGATTTTTCAGCATGTCAGCATGGGGAACATCAATGATTTTGGCTTATGAATATCTCAAGCGTTTGTGTGCAAAAGATGAACAGATGTG 968 0.4277 MAASDARAQSFGQTEINWDKLDKTKFYVVGAGIFTGITVALYPVSVVKTRLQVATKDTVERNAFSVMKGLLRTDGVPGLYRGFGTVITGAIPARVIFLTFLETTKVSAFRLLEPFRLSETTQAAIANGVAGMTSSLLAQSVFVPMDVVSQKLMVQGYAGHVKYSGGLDVARKVIRSDGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFIWRFLENGTTNEEAIPSVQKIMLVQAAGGIIAGATASCFTTPLDTIKTRLQVSGHEKRSSMKQVVQDLIKEDGWKGFYKGFGPRFFSMSAWGTSMILAYEYLKRLCAKDEQM 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01992 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Bva03g01992 322 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
Bva03g01992 322 Pfam Mitochondrial carrier protein 31 105 IPR018108 -
Bva03g01992 322 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Bva03g01992 322 Pfam Mitochondrial carrier protein 234 319 IPR018108 -
Bva03g01992 322 Gene3D Mitochondrial carrier domain 27 322 IPR023395 -
Bva03g01992 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Bva03g01992 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
Bva03g01992 322 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Bva03g01992 322 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Bva03g01992 322 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Bva03g01992 322 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 13 321 - -
Bva03g01992 322 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 13 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01992 Bva-Chr3 17916294 17920878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01992 16 320 Chloroplast and Mitochondria Gene Families AT5G15640 75.244 1.18e-171 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01992 K15121 - gmx:100781796 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01992 03 17916294 17920878 Bva04g00378 04 2223054 2228120 BWGD
Bva03g01992 03 17916294 17920878 Bva03g01992 03 17916294 17920878 ECH