Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01991 ATGGGCTTTCGTATGAGATCCATAACTCAATCTTTCTACGAAGCAAGTTGTAGCATTTTGTTTCTGAGTCTGCTTTCTTGTACTTGCTTCACTTCAACCGAAGCTTATGATGCCCTTGATCCGAATGGCAACATTACAATCAAATGGGATATAATGAGCTGGACTCCAGATGGTTATGTGGCTGTTGTCACAATAAACAACTTCCAACAATATCGCCATATTGAAGCACCAGGTTGGTCGCTAGGATGGACATGGGCTAAGAAGGAGGTCATATGGAGCATGATTGGAGGCCAAACCACAGAACAAGGAGATTGTTCAAAATTTAAGGGAAACATCCCACATTGCTGTAAAAAGGACCCAACAGTTGTAGATTTATTGCCAGGAACACCTTACAATCAGCAGATCGCAAATTGCTGCAAAGGTGGGGTACTCAGCTCATTTGTTCAGGATCCAGTCAATTCAGTTGCTGCATTTCAGGTAAGTGTTGGTAGAGCTGGAACCACTAACAAAACAGTCAAACTGCCGAAGAACTTCACTCTGAAAGCACCGGGACCGGGTTATACTTGTGGGCCAGCAAAAATTGTCAGACCCAGTCTATTCACTCAACCAGACAAAAGGAGAACAACCCAAGCACTCATGACATGGAACGTGACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCCACTTGCTGTGTCTCTCTTTCGTCTTTCTACAATGATACTATTGTGCCCTGTCCAACATGCTCATGTGGCTGCCAGACCAACTCATCTGGGAGCTGTGTAGAGGGAGATTCACCACATATACAGTCAGTAGTTCCCAGTTCAAGGAGTAATTATGCACCTTTGGTTCAATGTACTAGTCACATGTGCCCTATCCGAATCCACTGGCATGTTAAACTTAATTACAAGGAGTACTGGCGTGTGAAGGTCACTAtaactaatttcaattataggATGAACTATTCACAGTGGAACCTGGTTGTTCAGCACCCAAACTTCGACAATCTGACCCAACTTTTCAGTTTCAACTACAAGTCATTAACTCCTTATGGGGATATAAATGATACCGCAATGCTTTGGGGACTCAAGTTCTACAACGATTTACTTATGCAAGCCGGCCCTGCTGGTAACGTACAGTCAGAGCTACTCTTCCGGAAGGATGCATCAACTTTCACATTTGATAAGGGTTGGGCTTTTCCACGGAGGATCTATTTCAATGGCGACAACTGTGTCATGCCACCGCCAGATGCTTATCCATGGTTGCCGAACGCTGGTTCAAGACAGGAGGTTCCCCTTCTTGCTTTAGTAATGGCTTCCTTGTTAGCCTTGGTATTCTATGGATATCCTTA 1355 0.4354 MGFRMRSITQSFYEASCSILFLSLLSCTCFTSTEAYDALDPNGNITIKWDIMSWTPDGYVAVVTINNFQQYRHIEAPGWSLGWTWAKKEVIWSMIGGQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSFVQDPVNSVAAFQVSVGRAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVRPSLFTQPDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCQTNSSGSCVEGDSPHIQSVVPSSRSNYAPLVQCTSHMCPIRIHWHVKLNYKEYWRVKVTITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFNYKSLTPYGDINDTAMLWGLKFYNDLLMQAGPAGNVQSELLFRKDASTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRQEVPLLALVMASLLALVFYGYP 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01991 451 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Bva03g01991 451 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
Bva03g01991 451 PANTHER COBRA-LIKE PROTEIN 16 449 - -
Bva03g01991 451 PANTHER PROTEIN COBRA 16 449 IPR006918 GO:0010215|GO:0031225
Bva03g01991 451 PIRSF COBRA 8 450 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01991 Bva-Chr3 17907868 17911743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01991 1 449 COBRA Gene Family AT3G02210 73.894 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01991 - - gmx:100783820 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00380 04 2238462 2242299 Bva03g01991 03 17907868 17911743 BWGD
Bva03g01991 03 17907868 17911743 Bva03g01991 03 17907868 17911743 ECH
Bva03g01991 03 17907868 17911743 Bva04g00380 04 2238462 2242299 ECH