Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01990 ATGAGGCTTGTCATCTCAGCTTTCTGTCTTCTTGTGCTATTCTCTTATGCAGCTGCATATGATCCTTTGGATCCAAATGGGAATGTAACAATCAAATGGGATGTCATGTCTTGGACCCCAGATGGTTATGTGGCAGTTGTAACGATCAACAATTTCCAAACTTTTCGGCACATCATGAATCCTGGATGGACCTTAGGATGGTCATGGGCAAAGAAAGAAGTTATATGGTCCATGGTAGGGGCTCAAACTACCGAGCAAGGTGACTGTTCTAAGTTCAAAGGCAATGTCCCTCATTGTTGCAAGAAAACACCCACAGTTGTGGACTTGCTTCCTGGTGTGCCTTACAATCAGCAATTCACAAACTGCTGCAAAGGTGGAGTTGTAGAAGCATGGGGCCAAGACCCTTCAGCAGCTGTCTCAGCCTTCCAATTGAGTGTTGGCCAAGCAGGGACATCAAACAAGACAGTGAAATTACCCAAGAATTTCACTCTCCAGGCTCCTGGACCTGGCTACACTTGTGGCCCTGCTAAGATTGTTCCTTCCACCATTTTCCTTACACCTGATAAGCGCCGCAAGACACAAGCATTGATGACATGGAATGTAACCTGCACTTATTCACAATTTCTAGCTAGAAAGAATCCAAGTTGTTGTGTATCTCTGTCAACTTTCTACAATGAGACGATTACTCCTTGTCCGTCATGCGCTTGTGGTTGTCAGAACAAGAAGAATTGTGTCAAGAGCGACTCTAAACTCCTCAGCTTGGTGGGAGTCCACACACCACAGAAGGACAATGAACCATTGCTACAATGCACACATCATATGTGCCCCATCAGGGTACACTGGCATGTGAAACTCAACTATAAGGACTATTGGAGAGTCAAGATTGCCATCACAAATTTCAACTACAGAATGAATTACTCACTTTGGACTCTTGCTGTACAGCATCCAAATCTTAACAATGTCACTCAAGTTTTCAGCTTTGATTACAAGCCTGTGAATCCCTATGGATCCATAAATGACACTGGCATGTTCTATGGCATGAAATACTATAATGATCTGTTAATGGAAGCTGGACCGAGGGGGAACGTTCAGTCAGATGTGCTTCTTAAGAAGGACAAGGATACCTTCACCTTCAAGCAAGGGTGGGCATTTCCTCGCAAGGTCTATTTCAATGGTGATGAATGCATGATGCCTCCACCTGACTCATACCCATTTCTTCCTAACTCTGCCCGTGTAAACCTACCCACTTTCCCAGCATTCATCTTCTCATTGCTTTTCCGATTAGCCATTTGGTG 1295 0.444 MRLVISAFCLLVLFSYAAAYDPLDPNGNVTIKWDVMSWTPDGYVAVVTINNFQTFRHIMNPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVEAWGQDPSAAVSAFQLSVGQAGTSNKTVKLPKNFTLQAPGPGYTCGPAKIVPSTIFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSTFYNETITPCPSCACGCQNKKNCVKSDSKLLSLVGVHTPQKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPVNPYGSINDTGMFYGMKYYNDLLMEAGPRGNVQSDVLLKKDKDTFTFKQGWAFPRKVYFNGDECMMPPPDSYPFLPNSARVNLPTFPAFIFSLLFRLAIW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01990 431 PANTHER COBRA-LIKE PROTEIN 4 428 - -
Bva03g01990 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Bva03g01990 431 PIRSF COBRA 1 430 IPR006918 GO:0010215|GO:0031225
Bva03g01990 431 PANTHER PROTEIN COBRA 4 428 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01990 Bva-Chr3 17904892 17907489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01990 1 426 COBRA Gene Family AT3G29810 65.753 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01990 - - gmx:100783410 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01990 03 17904892 17907489 Bva04g00380 04 2238462 2242299 BWGD
Bva04g00381 04 2242415 2245395 Bva03g01990 03 17904892 17907489 BWGD
Bva03g01990 03 17904892 17907489 Bva03g01990 03 17904892 17907489 ECH
Bva03g01990 03 17904892 17907489 Bva04g00381 04 2242415 2245395 ECH