Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01986 atggaaggaaaatgCAGTGAGGGGCCGGCAATAGGGATAGACCTTGGCACCACTTACTCATGCGTTGCTGTCTGGCTGAATGATAGGGTGGAGATCATCACCAATGACCAAGGGAACAGGACTACTCCATCTTATGTTGCCTTCACAGATACCCAAAGGATGACTGGCGATGCTGCAAAGAACCAGGCTGCGGCAAATCCAACCAACACTGTATTCGATGCCAAAAGGTTGATTGGCAGGAATTTTAGTGACCCTTGTGTTTTGAATGATAGTATGCTGTGGCCATTTAAGGTGACTGCTGGTCCTGATGACAAACCCATGATTGTTGTTACTTATAAAAGTGAAGAGAAACATTTTTATGCTGAGGAGATCTCATCCATGATCCTAACAAAGATGCGTGAGATTGCTGAGAATTATCTTGGTTCAACCGTGAAGAATGCTGTTGTAACTGTGCCGGCTTATTTCAATAATTCTCAGCGTCAAGCCACCAAGGATGCCGGTGCTATTGCGGGCCTAAATATTATGCGAATGATCAATGAACCCACTGCGGCTGCTATTGCCTATGGTCTTGACAAGAAATCTAGTATTGTTGgtgaaagaaatatttttgtgtttgatcTTGGTGGTGGTACTTTTGATGTATCTCTTCTTAAAATAACAGAGAATGTCTTTGAAGTTAAGGCAACTGCCGGTGACACACACCTTGGAGGAGAGGACTTTGATAACAGATTGGTGAATCACTTTGTACTTCAGTTCaagagaaagaacaagaaggaTATAAGTGGAAATGCAAGAGCCCTTAGGAGGTTGAGAACTGCTTGTGAGAGGGGCAAGAGGGCTCTATCATCAACTATTGATGCCACTATTGAGGTAGATTGCTTGTGTGATGGTATTGACTTTTCTTCAACAATCACTCGTGCTAAGTTTGAGGAACTCAACATGGACCTTTTTACGCAGTGTCTTCAGACTGTGGAGATGTGTCTTAAAGATGCTAAGATGAATAAGTACGATGTCCATGACGTTGTTATTGTTGGTGGTTCTACCAGGATTCCCAAGGTACAGCAGCTACTGAGGAATTTCTTCAACGGGAAGGATCTCTGCAAGGACATCAATCCCGACGAGGCTGTTGCTTTTGGTGCAGCTGTCCAGGCAGCCGTCTTGAGTGGTCAAGGCAATGAGAAAGTTAACAGCTTAACACTACTGGATGTCACTCCGTTGTCCTTAGGTGTCGATGTCAAAGGAGATCTCATGTCTGTTGTAATACCTCGTAACACTATCATTCCTACAAAGAAGGAAGGCGGATTCACTACTTGTTTTGATAATCAGAGTAGTATATTGTTGTCGATATATGAGGGCGAGAGAACAATTGCAAGCGAGAACAACTTGTTGGGTCTGTTTACGCTCTCAGGCATCCCTCCAGCTCTCCGCCATGTCCCTTCGGTCAAAGTTTGCTTTGATATAGACACTAATGGTATCTTAAAGGTCACTGCAGTGGAAAAAGCATCTGGGAATGAGAATGGGATAGCCATAACTAATGTACTTGGAAGtttatcagaaaaagaaatatctagGATGATTCAAGACGCTGAGAAATTCAAGGTCGAAGATGAGAGGCGCAGAAAGAAGGCTTTAGCAAAAAATGATTTGGAGGATCATATCTACTACATGAAGAAGGctttgaaagaaaaggagattaGTTCAAAGATTTCTCCAGGAGAGATGGGCTATATGCAGAACGCAATTACGCGGGTCTTGTTATGGCTTGATGGAAACCAGAACGCAGAAGCAGGTGAGTTGGAGCATAGAAAGAAGGAGCTGATGAATGCTTGTACTCCTATTGTCTGGTTGAAGTTAGTGATGATGAGGATGATGGTatg 1877 0.414 MEGKCSEGPAIGIDLGTTYSCVAVWLNDRVEIITNDQGNRTTPSYVAFTDTQRMTGDAAKNQAAANPTNTVFDAKRLIGRNFSDPCVLNDSMLWPFKVTAGPDDKPMIVVTYKSEEKHFYAEEISSMILTKMREIAENYLGSTVKNAVVTVPAYFNNSQRQATKDAGAIAGLNIMRMINEPTAAAIAYGLDKKSSIVGERNIFVFDLGGGTFDVSLLKITENVFEVKATAGDTHLGGEDFDNRLVNHFVLQFKRKNKKDISGNARALRRLRTACERGKRALSSTIDATIEVDCLCDGIDFSSTITRAKFEELNMDLFTQCLQTVEMCLKDAKMNKYDVHDVVIVGGSTRIPKVQQLLRNFFNGKDLCKDINPDEAVAFGAAVQAAVLSGQGNEKVNSLTLLDVTPLSLGVDVKGDLMSVVIPRNTIIPTKKEGGFTTCFDNQSSILLSIYEGERTIASENNLLGLFTLSGIPPALRHVPSVKVCFDIDTNGILKVTAVEKASGNENGIAITNVLGSLSEKEISRMIQDAEKFKVEDERRRKKALAKNDLEDHIYYMKKALKEKEISSKISPGEMGYMQNAITRVLLWLDGNQNAEAGELEHRKKELMNACTPIVWLKLVMMRMMV 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01986 625 SUPERFAMILY Actin-like ATPase domain 198 389 IPR043129 -
Bva03g01986 625 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Bva03g01986 625 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Bva03g01986 625 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 550 IPR029047 -
Bva03g01986 625 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 545 614 IPR029048 -
Bva03g01986 625 Gene3D - 11 385 - -
Bva03g01986 625 Gene3D - 547 616 IPR029048 -
Bva03g01986 625 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Bva03g01986 625 PANTHER HEAT SHOCK PROTEIN 70KDA 5 614 IPR013126 GO:0005524|GO:0140662
Bva03g01986 625 PRINTS 70kDa heat shock protein signature 9 22 - -
Bva03g01986 625 PRINTS 70kDa heat shock protein signature 397 416 - -
Bva03g01986 625 PRINTS 70kDa heat shock protein signature 478 494 - -
Bva03g01986 625 PRINTS 70kDa heat shock protein signature 147 167 - -
Bva03g01986 625 PRINTS 70kDa heat shock protein signature 37 49 - -
Bva03g01986 625 PRINTS 70kDa heat shock protein signature 370 390 - -
Bva03g01986 625 PRINTS 70kDa heat shock protein signature 338 354 - -
Bva03g01986 625 PRINTS 70kDa heat shock protein signature 59 67 - -
Bva03g01986 625 PRINTS 70kDa heat shock protein signature 210 220 - -
Bva03g01986 625 CDD HSPA1-2_6-8-like_NBD 10 388 - -
Bva03g01986 625 Gene3D - 193 367 - -
Bva03g01986 625 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
Bva03g01986 625 Pfam Hsp70 protein 10 613 IPR013126 GO:0005524|GO:0140662
Bva03g01986 625 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 546 IPR029047 -
Bva03g01986 625 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 5 614 - -
Bva03g01986 625 Gene3D - 72 127 - -
Bva03g01986 625 Gene3D Actin; Chain A, domain 4 236 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01986 Bva-Chr3 17853439 17855988 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01986 1 614 Calmodulin-binding Proteins AT3G12580 69.544 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01986 K03283 - csin:114294116 871.692