Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01985 atggaaggaaaatgCAGTGAGGGGCCGGCAATAGGGATAGACCTTGGCACCACTTACTCATGCGTTGCTGTCTGGCTGAATGATAGGGTGGAGATCATCACCAATGACCAAGGGAACAGGACTACTCCATCTTATGTTGCCTTCACAGATACCCAAAGGATGACTGGCGATGCTGCAAAGAACCAGGCTGCGGCAAATCCAACCAACACTGTATTCGATGCCAAAAGGTTGATTGGCAGGAATTTTAGTGACCCTTGTGTTTTGAATGATAGTATGCTGTGGCCATTTAAGGTGACTGCTGGTCCTGATGACAAACCCATGATTGTTGTTACTTATAAAAGTGAAGAGAAACATTTTTATGCTGAGGAGATCTCATCCATGATCCTAACAAAGATGCGTGAGATTGCTGAGAATTATCTTGGTTCAACCGTGAAGAATGCTGTTGTAACTGTGCCGGCTTATTTCAATAATTCTCAGCGTCAAGCCACCAAGGATGCCGGTGCTATTGCGGGCCTAAATATTATGCGAATGATCAATGAACCCACTGCGGCTGCTATTGCCTATGGTCTTGACAAGAAATCTAGTATTGTTGgtgaaagaaatatttttgtgtttgatcTTGGTGGTGGTACTTTTGATGTATCTCTTCTTAAAATAACAGAGAATGTCTTTGAAGTTAAGGCAACTGCCGGTGACACACACCTTGGAGGAGAGGACTTTGATAACAGATTGGTGAATCACTTTGTACTTCAGTTCaagagaaagaacaagaaggaTATAAGTGGAAATGCAAGAGCCCTTAGGAGGTTGAGAACTGCTTGTGAGAGGGGCAAGAGGGCTCTATCATCAACTATTGATGCCACTATTGAGTGTCTTCAGACTGTGGAGATGTGTCTTAAAGATGCTAAGATGAATAAGTACGATGTCCATGACGTTGTTATTGTTGGTGGTTCTACCAGGATTCCCAAGGTACAGCAGCTACTGAGGAATTTCTTCAACGGGAAGGATCTCTGCAAGGACATCAATCCCGACGAGGCTGTTGCTTTTGGTGCAGCTGTCCAGGCAGCCGTCTTGAGTGGTCAAGGCAATGAGAAAGTTAACAGCTTAACACTACTGGATGTCACTCCGTTGTCCTTAGGTGTCGATGTCAAAGGAGATCTCATGTCTGTTGTAATACCTCGTAACACTATCATTCCTACAAAGAAGGAAGGCGGATTCACTACTTGTTTTGATAATCAGAGTAGTATATTGTTGTCGATATATGAGGGCGAGAGAACAATTGCAAGCGAGAACAACTTGTTGGGTCTGTTTACGCTCTCAGGCATCCCTCCAGCTCTCCGCCATGTCCCTTCGGTCAAAGTTTGCTTTGATATAGACACTAATGGTATCTTAAAGGTCACTGCAGTGGAAAAAGCATCTGGGAATGAGAATGGGATAGCCATAACTAATGTACTTGGAAGtttatcagaaaaagaaatatctagGATGATTCAAGACGCTGAGAAATTCAAGGTCGAAGATGAGAGGCGCAGAAAGAAGGCTTTAGCAAAAAATGATTTGGAGGATCATATCTACTACATGAAGAAGGctttgaaagaaaaggagattaGTTCAAAGATTTCTCCAGGAGAGATGGGCTATATGCAGAACGCAATTACGCGGGTCTTGTTATGGCTTGATGGAAACCAGAACGCAGAAGCAGGTGAGTTGGAGCATAGAAAGAAGGAGCTGATGAATGCTTGTACTCCTATTGTCTGGTTGAAGTTAGTGATGATGAGGATGATGGTatg 1790 0.4145 MEGKCSEGPAIGIDLGTTYSCVAVWLNDRVEIITNDQGNRTTPSYVAFTDTQRMTGDAAKNQAAANPTNTVFDAKRLIGRNFSDPCVLNDSMLWPFKVTAGPDDKPMIVVTYKSEEKHFYAEEISSMILTKMREIAENYLGSTVKNAVVTVPAYFNNSQRQATKDAGAIAGLNIMRMINEPTAAAIAYGLDKKSSIVGERNIFVFDLGGGTFDVSLLKITENVFEVKATAGDTHLGGEDFDNRLVNHFVLQFKRKNKKDISGNARALRRLRTACERGKRALSSTIDATIECLQTVEMCLKDAKMNKYDVHDVVIVGGSTRIPKVQQLLRNFFNGKDLCKDINPDEAVAFGAAVQAAVLSGQGNEKVNSLTLLDVTPLSLGVDVKGDLMSVVIPRNTIIPTKKEGGFTTCFDNQSSILLSIYEGERTIASENNLLGLFTLSGIPPALRHVPSVKVCFDIDTNGILKVTAVEKASGNENGIAITNVLGSLSEKEISRMIQDAEKFKVEDERRRKKALAKNDLEDHIYYMKKALKEKEISSKISPGEMGYMQNAITRVLLWLDGNQNAEAGELEHRKKELMNACTPIVWLKLVMMRMMV 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01985 596 Gene3D Actin; Chain A, domain 4 236 289 - -
Bva03g01985 596 PRINTS 70kDa heat shock protein signature 37 49 - -
Bva03g01985 596 PRINTS 70kDa heat shock protein signature 59 67 - -
Bva03g01985 596 PRINTS 70kDa heat shock protein signature 147 167 - -
Bva03g01985 596 PRINTS 70kDa heat shock protein signature 368 387 - -
Bva03g01985 596 PRINTS 70kDa heat shock protein signature 449 465 - -
Bva03g01985 596 PRINTS 70kDa heat shock protein signature 9 22 - -
Bva03g01985 596 PRINTS 70kDa heat shock protein signature 341 361 - -
Bva03g01985 596 Gene3D - 193 235 - -
Bva03g01985 596 PANTHER HEAT SHOCK PROTEIN 70KDA 5 290 IPR013126 GO:0005524|GO:0140662
Bva03g01985 596 PANTHER HEAT SHOCK PROTEIN 70KDA 291 585 IPR013126 GO:0005524|GO:0140662
Bva03g01985 596 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Bva03g01985 596 Gene3D - 291 341 - -
Bva03g01985 596 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 364 521 IPR029047 -
Bva03g01985 596 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 363 517 IPR029047 -
Bva03g01985 596 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 5 290 - -
Bva03g01985 596 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Bva03g01985 596 Gene3D - 72 127 - -
Bva03g01985 596 Gene3D - 518 587 IPR029048 -
Bva03g01985 596 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 516 585 IPR029048 -
Bva03g01985 596 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
Bva03g01985 596 Gene3D - 342 356 - -
Bva03g01985 596 SUPERFAMILY Actin-like ATPase domain 198 360 IPR043129 -
Bva03g01985 596 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 291 585 - -
Bva03g01985 596 ProSitePatterns Heat shock hsp70 proteins family signature 3. 312 326 IPR018181 -
Bva03g01985 596 Gene3D - 11 192 - -
Bva03g01985 596 Pfam Hsp70 protein 291 584 IPR013126 GO:0005524|GO:0140662
Bva03g01985 596 Pfam Hsp70 protein 10 289 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01985 Bva-Chr3 17837176 17840777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01985 1 585 Calmodulin-binding Proteins AT3G12580 66.287 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01985 K03283 - csin:114294116 815.839