Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01978 ATGGCAAGAAAATGCAATGAGGGACTGGCAATAGGAATAGACCTTGGAACGACATACTCATGCGTTGCCGTATGGGAGCACGGTAGGGTGGAGATAATCGCCAATGACCAAGGGAACAGGACTACTCCCTCTTACGTTGCCTTCACAGATACCCAAAGGATGGCCGGAGATGCTGCGAAGAATCAGGCTGCGGCAAATCCAACCAACACTGTATTCGGTAAATCCTTTTTCCTCTTGTTAATGTATATTGCATCTAAAGAGATCTCAgagta 272 0.4596 MARKCNEGLAIGIDLGTTYSCVAVWEHGRVEIIANDQGNRTTPSYVAFTDTQRMAGDAAKNQAAANPTNTVFGKSFFLLLMYIASKEISE 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01978 90 PANTHER HEAT SHOCK PROTEIN 70KDA 5 73 IPR013126 GO:0005524|GO:0140662
Bva03g01978 90 SUPERFAMILY Actin-like ATPase domain 9 76 IPR043129 -
Bva03g01978 90 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Bva03g01978 90 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 5 73 - -
Bva03g01978 90 Pfam Hsp70 protein 10 73 IPR013126 GO:0005524|GO:0140662
Bva03g01978 90 PRINTS 70kDa heat shock protein signature 9 22 - -
Bva03g01978 90 PRINTS 70kDa heat shock protein signature 59 67 - -
Bva03g01978 90 PRINTS 70kDa heat shock protein signature 37 49 - -
Bva03g01978 90 Gene3D - 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01978 Bva-Chr3 17767010 17767282 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01978 7 72 Calmodulin-binding Proteins AT3G12580 84.848 1.21e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01978 K03283 - gat:120823836 117.472