Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01977 ATGATTCTATCAAAGATGCGTGAGATTGCAGAGAATTATCTTGGTTCAACTGTGAGGAATGCTGTTGTAACTGTACCAGCCTATTTCAATAATTCTCAACGTCAAGCCACCAAAGATGCAGGTGCTATTTCTGGCCTAAATATCTTGCGGATAATTAATGAACCTACTGCAGCAGCTCTAGCATATGGTCTTGACAGGAAAACGGATTGGTTtggtgagaaaaatattttcatatttgatcTTGGCGGTGGTACTTTTGATGTGTCTCTCCTCACAATTGAAGATGATACTTTTGAAGTTAAGGCTACTGCTGGTCACACACGCCTAGGAGGAGAGGACTTTGATAACAGAATGGTGAATCACTTCGTACGAGAGTTCAATAGAAAGAACAGCAGGGACATAAGTGAAAATGCAAGGGCCATTAGGAGATTGAGGACTGCTTGTGAGAGGGCGAAGAGGGCTCTTTCTTCAACCACTGAGACCTCCGTTGAGGTAGATTGCCTATATGAAGGTATTGACTTCTATTCATCAATCACTCATGCTAAGTTTGAGGAACTCAACAAGGACTTGTTTGTGAAGTGTATTACCATTGTGGAAAGTTGTCTTAAAGATGCTAAGTTGGACAAGAATGATATCAACGATGTTGTTCTCGTCGGTGGTTCTACTAGGATTCCCAAAGTACAGCAGTTGTTGCGGAACTTCTTCAATGGTAAGAATCTCTTCAAGAACATCAACCCTGACGAGGCCGTTGCTTATGGTGCTGCTGTCCATGCAGCCAAATTGAGTGGTCAAGGCAATGAGAAGGTCAATAGCTTAATACTATTGGATGTTACTCCATTGTCCCTTGGTGTCAGTGTTAGAGGAGATTTACTGGCTGTTGTAGTACCTCGCAACACTAGCATTCCTACACAGAAAGAACACGGATTCACTACTACCGAAGATAATCAGACTTGTGTACTGTTTTCGATTTATGAGAGTGAGAGAACAATAGCCAGCGAGAATTATTTGTTGGGACGGTTTAGGCTTGAAGGCATTAGTCCAGCTCTCCGCCGTGTCCCATCTGTTAAAGTCTGCTTTGATATTGATGCTAATGGTATTTTAAGGGTCTCTGCTAAAGATAAAGCATCTGGGAATGAGGCTAGGATTACCTTAACAAATGTAAGAGGAAGCTTGTCAAAAGGAGAAATTGATCGGATGATTCAAGATGCTGTGAAATTCAAGGCTGAAGATGAGAGGCACAGAAGAAGGGCTTTAGCTAAGAACGATTTGGAGGATTATATATACGATATGAAGAAAGCTTTGAAAGATGAAGGCATCAGTTCAATGATTTCCCAAAAAGAGACGATGAATATACGGGGTGCAATAGTGCGGGTCTTGCTGTGGCTTGAAGGCAACCAGCATGCAGAAGCAGAGGAGTTTGAGCGTGGAAAGAAGGAGCTGGTAAAAGCTTGCGTTCCCATTTCTATTGCCATGTCCTTACGaggagatgatgatgatgatggcaTGGATGATTAccgtttcaaaattttatgtgatatttCTGGGGACCCTTTCTATTCCTTTAACTCAACCTA 1574 0.4041 MILSKMREIAENYLGSTVRNAVVTVPAYFNNSQRQATKDAGAISGLNILRIINEPTAAALAYGLDRKTDWFGEKNIFIFDLGGGTFDVSLLTIEDDTFEVKATAGHTRLGGEDFDNRMVNHFVREFNRKNSRDISENARAIRRLRTACERAKRALSSTTETSVEVDCLYEGIDFYSSITHAKFEELNKDLFVKCITIVESCLKDAKLDKNDINDVVLVGGSTRIPKVQQLLRNFFNGKNLFKNINPDEAVAYGAAVHAAKLSGQGNEKVNSLILLDVTPLSLGVSVRGDLLAVVVPRNTSIPTQKEHGFTTTEDNQTCVLFSIYESERTIASENYLLGRFRLEGISPALRRVPSVKVCFDIDANGILRVSAKDKASGNEARITLTNVRGSLSKGEIDRMIQDAVKFKAEDERHRRRALAKNDLEDYIYDMKKALKDEGISSMISQKETMNIRGAIVRVLLWLEGNQHAEAEEFERGKKELVKACVPISIAMSLRGDDDDDGMDDYRFKILCDISGDPFYSFNST 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01977 524 ProSitePatterns Heat shock hsp70 proteins family signature 3. 215 229 IPR018181 -
Bva03g01977 524 Gene3D - 2 259 - -
Bva03g01977 524 PRINTS 70kDa heat shock protein signature 21 41 - -
Bva03g01977 524 PRINTS 70kDa heat shock protein signature 244 264 - -
Bva03g01977 524 PRINTS 70kDa heat shock protein signature 212 228 - -
Bva03g01977 524 PRINTS 70kDa heat shock protein signature 352 368 - -
Bva03g01977 524 PRINTS 70kDa heat shock protein signature 84 94 - -
Bva03g01977 524 PRINTS 70kDa heat shock protein signature 271 290 - -
Bva03g01977 524 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 497 - -
Bva03g01977 524 SUPERFAMILY Actin-like ATPase domain 73 263 IPR043129 -
Bva03g01977 524 Gene3D - 67 241 - -
Bva03g01977 524 PANTHER HEAT SHOCK PROTEIN 70KDA 1 497 IPR013126 GO:0005524|GO:0140662
Bva03g01977 524 Gene3D - 420 509 IPR029048 -
Bva03g01977 524 Pfam Hsp70 protein 1 488 IPR013126 GO:0005524|GO:0140662
Bva03g01977 524 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 419 489 IPR029048 -
Bva03g01977 524 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 267 424 IPR029047 -
Bva03g01977 524 ProSitePatterns Heat shock hsp70 proteins family signature 2. 78 91 IPR018181 -
Bva03g01977 524 SUPERFAMILY Actin-like ATPase domain 1 66 IPR043129 -
Bva03g01977 524 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 266 419 IPR029047 -
Bva03g01977 524 Gene3D Actin; Chain A, domain 4 111 193 - -
Bva03g01977 524 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01977 Bva-Chr3 17764756 17766330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01977 1 504 Calmodulin-binding Proteins AT3G12580 64.961 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01977 K03283 - gmx:100816111 652.129