Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01976 ATGCTTGATGCCAAGAGGTTAATCGGTAGGAAATTCAGTGACCCTTGTGTTTTGAATGATAAGATGCTGTGGCCATTTAAGGTGACTGCTGGTCCTGATGACAAACCCTTGATTGTTGTTACTGATAAAACGTCAACCACCAAGGATACTGGTGTTATTGTGGGCCTAAATATTATGCGAATGATCAATGAACCCACTGCGGCTTCTATTGCCTATGGTCTTGACAAGAAATCTAGTCTTGTTGgtgaaagaaatatttttgtgtttgatcTTGGTGGTGGTACTTCTGATGTATCTCTTAAAATAACAGAGGATGTCTTTGAAGTTAAGGCAACCGCCGGTGACACACACCTTGGAGGAGAGGACTTTGATAACAGAATGGTGAATAACTTTGTAATTGAGTTCaagagaaagaacaagaaggaTATAAGTGGAAATGCGAGAGCCCTTAGGAGGTTGAGACCTGCTTGTGAGAGGGGCAAGAGGGCTCTATCATCAACTGTTGATACCACTATTGAGTGTCTTGAGACTGTGGAGATGTGTCCTAAAGATTCTAAGATGAATAAGTACGATGTCCATGGCGCTGTAATTATTGGTGGTTCCACCAGGATTCCCAAGGTACAGCAGCCACTGAGGAATTTCTTCAGCGGGAAGGATCTCTGCAAGGACATCAATCCCGACGAGGCTGTTGCTTTTGGTGCAGCCGTCTTGAGTGGTCAAGGCAATGAGAAAGTTAACAGCTTAACACTATTGGATCTCACACTGTTGTTCTTAGGTGTCAGTGTTAAAGGAGATCTCATGACTGTTGTAATACCTCGTAACACTATCATTCCAACAAAGAAGGAAGACGGATTCACTACTTGTTTTGATAATCAGAGCAGTATATTGTTCTCGATATA 899 0.406 MLDAKRLIGRKFSDPCVLNDKMLWPFKVTAGPDDKPLIVVTDKTSTTKDTGVIVGLNIMRMINEPTAASIAYGLDKKSSLVGERNIFVFDLGGGTSDVSLKITEDVFEVKATAGDTHLGGEDFDNRMVNNFVIEFKRKNKKDISGNARALRRLRPACERGKRALSSTVDTTIECLETVEMCPKDSKMNKYDVHGAVIIGGSTRIPKVQQPLRNFFSGKDLCKDINPDEAVAFGAAVLSGQGNEKVNSLTLLDLTLLFLGVSVKGDLMTVVIPRNTIIPTKKEDGFTTCFDNQSSILFSI 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01976 299 SUPERFAMILY Actin-like ATPase domain 82 238 IPR043129 -
Bva03g01976 299 Gene3D - 222 236 - -
Bva03g01976 299 Gene3D - 174 221 - -
Bva03g01976 299 Pfam Hsp70 protein 46 173 IPR013126 GO:0005524|GO:0140662
Bva03g01976 299 Pfam Hsp70 protein 2 41 IPR013126 GO:0005524|GO:0140662
Bva03g01976 299 Pfam Hsp70 protein 174 295 IPR013126 GO:0005524|GO:0140662
Bva03g01976 299 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 237 299 IPR029047 -
Bva03g01976 299 PANTHER HEAT SHOCK PROTEIN 70KDA 45 173 IPR013126 GO:0005524|GO:0140662
Bva03g01976 299 PANTHER HEAT SHOCK PROTEIN 70KDA 174 297 IPR013126 GO:0005524|GO:0140662
Bva03g01976 299 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 45 173 - -
Bva03g01976 299 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 2 44 - -
Bva03g01976 299 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 243 299 IPR029047 -
Bva03g01976 299 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 174 297 - -
Bva03g01976 299 SUPERFAMILY Actin-like ATPase domain 2 76 IPR043129 -
Bva03g01976 299 PANTHER HEAT SHOCK PROTEIN 70KDA 2 44 IPR013126 GO:0005524|GO:0140662
Bva03g01976 299 Gene3D - 47 76 - -
Bva03g01976 299 Gene3D - 2 46 - -
Bva03g01976 299 Gene3D Actin; Chain A, domain 4 119 172 - -
Bva03g01976 299 Gene3D - 77 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01976 Bva-Chr3 17759149 17760976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01976 1 299 Calmodulin-binding Proteins AT3G12580 55.145 4.13e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01976 K03283 - mnt:21407908 369.777