Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01974 ATGGATCCAAAAATTGAAGGGCCTGCAATTGGGATAGATCTGGGAACAAGCTATTCATGCGTTGGGGTTTGGCTCAACAATCGGGTGGAGATCATATCCAATGACCAAGGGAAAAGACTTACACCGTCCTGTGTTGCCTTCACAGACACTGAAAGGTTCATCGGCAATCTTGCTAAGGACCGGGCTGTCATGAACCCAACTAACACTGTATTTGaTGTAAAGAGATTTATCGGAAGAAAGTTAAGTGATCCCATTATTAAGAAAGACATGACCAAATGGCCATTTAAGGTCAATGACGGTCCTCAAGGTGAACCCAAGATTGTTGTTACTTATAAGaatgagaagaagaatttttccGCTGAGCAAATCTCATCTATGATCTTGACGAGGATGCGTGAGATTGCAGAGGCTTACTTAGGTTTAAAGGTAAAAAATGCAGTTATCTCCGTACCAACTAATTTCAATAGCTCCCAACGTCAAGCTACCAAAGATGCCGGTGTTATTGCCGGTCTCAATATTATACAGATAATCAATGAGCCTACTGCTGCAGCTGTTGCATATGGTCTGGACAAGAAAGATGATAGTGGTACTATAGGAATAAGAAATGTTGTCCTGTTTGATCTTGGTGGCGGTACTTGCGATGTATCTCTTGTTTCAATAGAGAATGATACTATCAGAGTCCTGGCCACTGCTGGAGACACTCACCTCGGAGGTGAGGACTTTGATAACAGAATGGTGAACCACTATGTACAGAAGTTAAAGACAGAGAACCATGATATTACTGGAAATCCAAGAGCCCTTAGAAAATTGAGAATTGCTTGTGAGAGGGCAAAGAGGGAACTGTCTTCGACTACTGACACCATCATTCATATAGATTCTTTATATGAGGATGATGTTGACTTTCATGAATCAATTACTAGAAAAACATTTGAGAAACTTAACGAGGACCTCTTTGAGAAGTGTAAGAATCTCGTGAAAATGTGTCTTGATGATGCTAACATGGACGTGGACCATGTTGATGATGTTGTCCCCGTTGGAGGCTCTACTAGGATTCCGAAAGTGTA 1064 0.4079 MDPKIEGPAIGIDLGTSYSCVGVWLNNRVEIISNDQGKRLTPSCVAFTDTERFIGNLAKDRAVMNPTNTVFDVKRFIGRKLSDPIIKKDMTKWPFKVNDGPQGEPKIVVTYKNEKKNFSAEQISSMILTRMREIAEAYLGLKVKNAVISVPTNFNSSQRQATKDAGVIAGLNIIQIINEPTAAAVAYGLDKKDDSGTIGIRNVVLFDLGGGTCDVSLVSIENDTIRVLATAGDTHLGGEDFDNRMVNHYVQKLKTENHDITGNPRALRKLRIACERAKRELSSTTDTIIHIDSLYEDDVDFHESITRKTFEKLNEDLFEKCKNLVKMCLDDANMDVDHVDDVVPVGGSTRIPKV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01974 354 PRINTS 70kDa heat shock protein signature 8 21 - -
Bva03g01974 354 PRINTS 70kDa heat shock protein signature 36 48 - -
Bva03g01974 354 PRINTS 70kDa heat shock protein signature 58 66 - -
Bva03g01974 354 PRINTS 70kDa heat shock protein signature 339 354 - -
Bva03g01974 354 PRINTS 70kDa heat shock protein signature 146 166 - -
Bva03g01974 354 PRINTS 70kDa heat shock protein signature 211 221 - -
Bva03g01974 354 PANTHER HEAT SHOCK 70 KDA PROTEIN 18-RELATED 7 354 - -
Bva03g01974 354 Gene3D - 192 354 - -
Bva03g01974 354 SUPERFAMILY Actin-like ATPase domain 202 354 IPR043129 -
Bva03g01974 354 Gene3D - 71 126 - -
Bva03g01974 354 Pfam Hsp70 protein 9 354 IPR013126 GO:0005524|GO:0140662
Bva03g01974 354 Coils Coil 267 287 - -
Bva03g01974 354 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Bva03g01974 354 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Bva03g01974 354 Gene3D - 10 191 - -
Bva03g01974 354 Gene3D Actin; Chain A, domain 4 237 320 - -
Bva03g01974 354 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Bva03g01974 354 PANTHER HEAT SHOCK PROTEIN 70KDA 7 354 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01974 Bva-Chr3 17732865 17737832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01974 1 354 Calmodulin-binding Proteins AT5G02500 66.761 3.27e-172 488