Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01972 ATGGCTAGAAATGATGAGGGACCTGCAGTGGGAATAGATCTAGGCACCACATACTCGTGCGTTGGAGTGTGGAAGAGCAACGGTGTTGATATTATCATAAACGAACAAGGGTACAGGATCACTCCATCTGTTGTTGCCTTCAAAAACGCCCAGATGTTGATAGGCGATGCCGCCAAGAACCAAGCTCCCATGAACCCAACTAACACCATATCCGaTGCAAAGAGGCTAATTGGTAGGATGTTTAGAGATCCCATTGTTCAAGCTGATATGAAGGTGTGGCCATTCAAGGTCATTGCTGATGATGAAGATAAACCTAAGATTGTTGTTACTAGTGGGAATGAGGAGAAGCAATATTATGCTGAAGAGATCTCATCAATGATCTTAATAAAGATGCGTGAGATTGCAGAAGCTAAATTGGGAAAAATTGTAAAGAATGCAGTTATCACTGTGCCCGCTTACTTTAATGATTCACAACGCCAAGCTACTAAAGATGCTGGTACTATTGCTGGCCTCAATATTTTGCGAATAATCAATGAGCCAACTGCAGCAGCCATTGCATATGGTCTTGACAAGAAAGATACTTTTGATGGTGAAAGAACTGTCTTCATCTTTGATATTGGAGGTGGTACTTTTGATGTTTctcttcttaaattaaatggtgataaatttgaagttttggCCACTAATGGAGACACTCACCTTGGCGGAGAGGACTTTGATAACAACCTGGTGAACCATTTTGTAGGTATGTTCAAGAGAAAGTACAATGAAGACATTAGTCAAAATGCAAGAGCCCTTAGGAGGTTGAAAACTACATGTGAGATAGCAAAGAGAGAACTCTCTTCTGTTAATCAGACGAATATTCAGATAGTAAGTTTGTACAAGGGTATTGACTTTGATACAACAATCACTCGTGCTAAGTTTGAAGAACTCAACATGGAGCTCTTTATGAAGTGTATGAAGATTGTAAAGCTGTGCCTTAGTAATGCAAAGATGGATAAGAAGAGTGTCCATGAAGTTGTCATGGTTGGTGGTTCTACGAGGATTCCCAAAGTACAGCAGCTATTGCGGGAAGTGTTTGATGAAAAGGAGCTATGCAACAGCATCCACCCTGATGAGGCTGTTGCTTTTGGTGCCGCTATTCTGGCTGCGAAGTTGACTGGTCAAGGAAATGACGAAGTAAAAAACTTGTCACTATCGGATGTTACTCCTCTCTCCCTTGGTATATATACTCATCGAGATATCATGGATGTAGTAATTCCTCGAAATACTAAAGTTCCCACAAAGATTGAGAAAACTTACACGACGGCTGAGGATAATCAAACCATCATTCGAATTAAGGTTTATGAGGGTGAGAGAAAAGTAGCAAGTGCTAACAACATGCTCGGTGAGTTTACACTCTCAGGCCTTACCCGTGCTCCCCGTAATGTTACGGAGGTTAAAGTTATATTTGACATTGACGCAAATGGTATCCTGAAAGTTTCTGCGGAGGAAATATCCAATGGGAAAAAGAAGTTGTTCAAGAAGGTAATCAAGAAGGAGATTACCGTAATAAATGACAAGAGAAGAttgacaaaggaagaaattgatagGATAATTCGAGAAGCTGAGAAATTCAAGGCTGAAGATGATGTGCACAAGAAGAAAGTTGATGCGAAGAATGCTTTAGAGAAATATGGCTACAAAATGAGGAATGCTATAAATGATGAGAAGATCAAGTCAAAGCTTTCCCCACAAGACAAGAAGAAGATTGAGGATGCAATTGAGGTTGTCATGAAATGGGTTGAAGCCATTGAGCTTGCAGAAATTGAAGATTATAAGCATAGAATGAAGGAACTCGGGAGCATCTGTAAGCCAACTCTAGACAAACTGTTTCAAGGCAGGGATTGTGTTGATAGTGATGAGGACTGTGATACAAGTTCAGCTGGTGGTAATCGTAGGTATTCTACTGTGACAAAATTTGTAGGGTTTCTTTTGCAGATAACCGTTGCAGCCGTTGCGGGTAATATTTCTGAGTTAGTATCTCTTTG 2030 0.3951 MARNDEGPAVGIDLGTTYSCVGVWKSNGVDIIINEQGYRITPSVVAFKNAQMLIGDAAKNQAPMNPTNTISDAKRLIGRMFRDPIVQADMKVWPFKVIADDEDKPKIVVTSGNEEKQYYAEEISSMILIKMREIAEAKLGKIVKNAVITVPAYFNDSQRQATKDAGTIAGLNILRIINEPTAAAIAYGLDKKDTFDGERTVFIFDIGGGTFDVSLLKLNGDKFEVLATNGDTHLGGEDFDNNLVNHFVGMFKRKYNEDISQNARALRRLKTTCEIAKRELSSVNQTNIQIVSLYKGIDFDTTITRAKFEELNMELFMKCMKIVKLCLSNAKMDKKSVHEVVMVGGSTRIPKVQQLLREVFDEKELCNSIHPDEAVAFGAAILAAKLTGQGNDEVKNLSLSDVTPLSLGIYTHRDIMDVVIPRNTKVPTKIEKTYTTAEDNQTIIRIKVYEGERKVASANNMLGEFTLSGLTRAPRNVTEVKVIFDIDANGILKVSAEEISNGKKKLFKKVIKKEITVINDKRRLTKEEIDRIIREAEKFKAEDDVHKKKVDAKNALEKYGYKMRNAINDEKIKSKLSPQDKKKIEDAIEVVMKWVEAIELAEIEDYKHRMKELGSICKPTLDKLFQGRDCVDSDEDCDTSSAGGNRRYSTVTKFVGFLLQITVAAVAGNISELVSL 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01972 676 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 636 - -
Bva03g01972 676 Coils Coil 266 286 - -
Bva03g01972 676 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 551 629 IPR029048 -
Bva03g01972 676 Pfam Hsp70 protein 9 623 IPR013126 GO:0005524|GO:0140662
Bva03g01972 676 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Bva03g01972 676 Gene3D - 10 384 - -
Bva03g01972 676 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 552 IPR029047 -
Bva03g01972 676 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Bva03g01972 676 Gene3D - 192 366 - -
Bva03g01972 676 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Bva03g01972 676 PANTHER HEAT SHOCK PROTEIN 70KDA 1 636 IPR013126 GO:0005524|GO:0140662
Bva03g01972 676 SUPERFAMILY Actin-like ATPase domain 9 191 IPR043129 -
Bva03g01972 676 Gene3D Actin; Chain A, domain 4 235 318 - -
Bva03g01972 676 Coils Coil 522 542 - -
Bva03g01972 676 Gene3D - 553 650 IPR029048 -
Bva03g01972 676 Gene3D - 71 126 - -
Bva03g01972 676 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 557 IPR029047 -
Bva03g01972 676 PRINTS 70kDa heat shock protein signature 369 389 - -
Bva03g01972 676 PRINTS 70kDa heat shock protein signature 337 353 - -
Bva03g01972 676 PRINTS 70kDa heat shock protein signature 146 166 - -
Bva03g01972 676 PRINTS 70kDa heat shock protein signature 477 493 - -
Bva03g01972 676 PRINTS 70kDa heat shock protein signature 58 66 - -
Bva03g01972 676 PRINTS 70kDa heat shock protein signature 8 21 - -
Bva03g01972 676 PRINTS 70kDa heat shock protein signature 36 48 - -
Bva03g01972 676 PRINTS 70kDa heat shock protein signature 209 219 - -
Bva03g01972 676 PRINTS 70kDa heat shock protein signature 396 415 - -
Bva03g01972 676 SUPERFAMILY Actin-like ATPase domain 196 388 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01972 Bva-Chr3 17726685 17730126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01972 1 627 Calmodulin-binding Proteins AT3G12580 64.434 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01972 K03283 - thj:104809899 812.757