Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01971 ATGGAGAGAATGGATCCAAAAAGTGAAGGACCTGCAATTGGGATAGATCTGGGAACAAGCAATTCATGCGTTGGGGTTTGGCTGAACAATCGGGTGGAGATCATATCTGACGACCAAGGGAAAAGACTTACACCGTCTTGTGTTGCCTTCACAAGCACAGAGAGGTTCATTGGCGATCCTGCTAAGAACCGGGCTACCATGAACCCAACTAACACTGTATTTGATGTAAAGAGATTTATTGGAAGAAAGTTTAGCGATCCCATTGTTCAAGAAGACATAAACGAATGGCCATTTAGGGTCATTGATGGTTCTCATGGTGAACCCAAGATTGTTGTTAATTATAAGAATGAGGAGAAGAACTTTTTTGCTGAGGAAATCTCATCTATGATCTTGACGAGGATGCGCGAGATTGCAGAGGTTTACCTAGGTTCAAAGATAAAAAGTGCAGTTGTCTCTGTACCAGCTAATTTCAACAGCTCACAACGTCAAGCTACCAAAGATGCTGGTGTTATTGCTGGTCTCAATATTATGCGGATAATCAATGAGCCTACTGCTGCAGCTATTGCATATTGTGTCGACAAGAAAGATGATAGTGATACTATAGGCATAAGAAATGTTGTCATGTTTGATCTTGGTGGTGGTACTTGTGATGTATCTCTTGTTTCGATAGAGAATGATACTATGAGAGTACTAGCCACTGCTGGAGACACTTACCTCGGAGGTGAGGACTTTGACAACAGAATGGTGAACCACTATGTACAGAAGTTAAAGACAGAAAACCATAATATTACTGGTAATCCAAGAGCTCTTAGAAAATTGAGAATTGCTTGTGAGAGGGCAAAGAGGGAACTGTCCCTGACCACTGACACCACCATTCATATAGATTCTTTATATGAGGATGATGTGGACTTCCATGAATCAATTACTAGAAATACATTTGAGAAACTTACCGAGGACCTCTTGGAAAAGTGTAGGAATCTCGTGAAAATGTGTCTTGACGATGCTAACATGGACGTGGACCGTGTTGATGACGTTGTCCTGGTTGGTGGTTCTACTAGGATTCCCAAAGTGCAACAGCTATTACAAGACTTGTTCCATAGGGAGAATCTAATCTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCCATATTGAGTGGTCAGTTCAATGAGAAGGTTCCAAACTTGTCGATATTGGATGTCAGTCCTCTGTCCCTGGGATATAGTTTGGGAAATGCCATGCATGTAATGATTCCCAGGAATAACACTTTCCCTTCAAAGAAGGCAAAAGTACTTACTGAGCCAAAAGATTACCAAACCCTTAAGGCTTATGAGGGTGAGAACAACTTGCTGGGGAAGCTTTGCCTTTCTGACGTTCCTGCAGATGATGGTCATGTTGACATTCAAATCGAAGTTTGCTTTGATACTGACGCTAATGGTATCTCCAACTTCTCTGCAGTGGAAACTTCCTCCAAGACGAAAATAATGATGAAGTATGAGAATGAAAGActaacagagaaagaaattgagagAATAATTCGAGAAGTTGAGAAACTCAACGCTGAAGATGAGGAGTTCAAGGAGAAGGTAAAAGCAAAGAATGATTTGGAGGAGTGCGCATACAAAGTGAGGAAGGAGCTTATTAATACAAAGCTTTTCCCAGTGGACAAGAAGAAGATACTTGATGCAGTTGACGAAACTATACAGTGGCTTGATGCCAACGAGCATGCAGAAACAGTCGAGTATATGGATCGTAAGAAAGTGATTGAGAGCCTTATCAACGAGGAAAAACAGGTTAGGGCTGACGTCGATCGTGGCGCGTCTTGTGCAGTTGCAGCTTTCCATGTTAAGGAAGAAAATGTAGAAGAAATTATACAGGaacatgatgatgaagaacATTGCCAGTTATTCAAGGCTGCCAATGATTCCATAATGGCGAAGGAGGAAAGTGCCAGTCAAGATACTCCACGCACGACCTTACGGGATTTATTACGAGCATATGACATCAAGTG 2033 0.4137 MERMDPKSEGPAIGIDLGTSNSCVGVWLNNRVEIISDDQGKRLTPSCVAFTSTERFIGDPAKNRATMNPTNTVFDVKRFIGRKFSDPIVQEDINEWPFRVIDGSHGEPKIVVNYKNEEKNFFAEEISSMILTRMREIAEVYLGSKIKSAVVSVPANFNSSQRQATKDAGVIAGLNIMRIINEPTAAAIAYCVDKKDDSDTIGIRNVVMFDLGGGTCDVSLVSIENDTMRVLATAGDTYLGGEDFDNRMVNHYVQKLKTENHNITGNPRALRKLRIACERAKRELSLTTDTTIHIDSLYEDDVDFHESITRNTFEKLTEDLLEKCRNLVKMCLDDANMDVDRVDDVVLVGGSTRIPKVQQLLQDLFHRENLICKSINPDEAVAYGAAVQAAILSGQFNEKVPNLSILDVSPLSLGYSLGNAMHVMIPRNNTFPSKKAKVLTEPKDYQTLKAYEGENNLLGKLCLSDVPADDGHVDIQIEVCFDTDANGISNFSAVETSSKTKIMMKYENERLTEKEIERIIREVEKLNAEDEEFKEKVKAKNDLEECAYKVRKELINTKLFPVDKKKILDAVDETIQWLDANEHAETVEYMDRKKVIESLINEEKQVRADVDRGASCAVAAFHVKEENVEEIIQEHDDEEHCQLFKAANDSIMAKEESASQDTPRTTLRDLLRAYDIK 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01971 677 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 539 601 IPR029048 -
Bva03g01971 677 ProSitePatterns Heat shock hsp70 proteins family signature 1. 15 22 IPR018181 -
Bva03g01971 677 Gene3D - 13 390 - -
Bva03g01971 677 ProSitePatterns Heat shock hsp70 proteins family signature 2. 208 221 IPR018181 -
Bva03g01971 677 SUPERFAMILY Actin-like ATPase domain 205 392 IPR043129 -
Bva03g01971 677 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 398 544 IPR029047 -
Bva03g01971 677 SUPERFAMILY Actin-like ATPase domain 11 194 IPR043129 -
Bva03g01971 677 Pfam Hsp70 protein 12 602 IPR013126 GO:0005524|GO:0140662
Bva03g01971 677 PANTHER HEAT SHOCK PROTEIN 70KDA 4 602 IPR013126 GO:0005524|GO:0140662
Bva03g01971 677 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 397 540 IPR029047 -
Bva03g01971 677 Gene3D - 195 372 - -
Bva03g01971 677 Coils Coil 509 543 - -
Bva03g01971 677 Gene3D - 74 129 - -
Bva03g01971 677 ProSitePatterns Heat shock hsp70 proteins family signature 3. 345 359 IPR018181 -
Bva03g01971 677 PRINTS 70kDa heat shock protein signature 61 69 - -
Bva03g01971 677 PRINTS 70kDa heat shock protein signature 375 395 - -
Bva03g01971 677 PRINTS 70kDa heat shock protein signature 39 51 - -
Bva03g01971 677 PRINTS 70kDa heat shock protein signature 214 224 - -
Bva03g01971 677 PRINTS 70kDa heat shock protein signature 149 169 - -
Bva03g01971 677 PRINTS 70kDa heat shock protein signature 474 490 - -
Bva03g01971 677 PRINTS 70kDa heat shock protein signature 402 421 - -
Bva03g01971 677 PRINTS 70kDa heat shock protein signature 342 358 - -
Bva03g01971 677 PRINTS 70kDa heat shock protein signature 11 24 - -
Bva03g01971 677 Gene3D - 541 604 IPR029048 -
Bva03g01971 677 Gene3D Actin; Chain A, domain 4 240 323 - -
Bva03g01971 677 PANTHER 70 KDA HEAT SHOCK PROTEIN 4 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01971 Bva-Chr3 17722406 17726007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01971 4 601 Calmodulin-binding Proteins AT3G12580 61.463 0.0 718