Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01964 ATGCGCCGATCTGAGGAAGGAGCTTTCTCTGAGGTGAAGAAGACAAATATAAGCATATTACAGGGGCATCTAAAACGAAGAGGGAGGGAGCGGAAAACATTGAAGCTAAAGAAAGAGTTGGAAGCTGGCAAAATGGGTTCTGTTTGTTGTTGTTTAagtgttgatgattttgaaGATTATGTAAATCCAAATAGTTCAGTATATAGGAACTGTTTGTGTCTCAGTTGCTTCATACACAACTTTCTGAATGTGTATACATCAATATTCCGCAGAGGGGAAGTGCATTCCATTCCTTCATCTATCCAGGGGGCAGCATCTATGACCTCTACTGCTTCACTTGATAATTCTCTATCTGACATCTATCGATCTCCTCCAAGACCCTTGCCATATGATGCAGACCCCAGGTTTTTCCGTTCACAGCGTGATGGACTAGTTTCAAGACGTGAGAAGGGTTCAAGTCATTCAAATGAAGAATCAGAACCTCTAAGAGGTGATATAGTTATGGACCCAGAATCTTTAAGTTTGGGAGACAAATGGAATGAGCATGCTTGTGAAGATGGATCAAAGGAATACCGTTCTAAGTCCTCTCTAAGACTCTCATCAGCAAAATATACAACTGTCGGGCTTATAAATGCATCAACAGAAGATGAGGATGTGTGCCCAACTTGTCTTGAAGAATATACCGAAGAAAATCCGAAGATAATGACAAAATGCTctcatcattttcatcttaGTTGCATTTATGAGTGGATGGAAAGAAGTGACAACTGTCCTGTTTGTGGGAAGGTGATGGTATTCAATGAAACGACCTA 812 0.3929 MRRSEEGAFSEVKKTNISILQGHLKRRGRERKTLKLKKELEAGKMGSVCCCLSVDDFEDYVNPNSSVYRNCLCLSCFIHNFLNVYTSIFRRGEVHSIPSSIQGAASMTSTASLDNSLSDIYRSPPRPLPYDADPRFFRSQRDGLVSRREKGSSHSNEESEPLRGDIVMDPESLSLGDKWNEHACEDGSKEYRSKSSLRLSSAKYTTVGLINASTEDEDVCPTCLEEYTEENPKIMTKCSHHFHLSCIYEWMERSDNCPVCGKVMVFNETT 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01964 270 Pfam RING-H2 zinc finger domain 217 260 IPR024766 GO:0008270
Bva03g01964 270 SMART ring_2 220 260 IPR001841 -
Bva03g01964 270 MobiDBLite consensus disorder prediction 144 166 - -
Bva03g01964 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 195 265 IPR013083 -
Bva03g01964 270 ProSiteProfiles Zinc finger RING-type profile. 220 260 IPR001841 -
Bva03g01964 270 MobiDBLite consensus disorder prediction 144 165 - -
Bva03g01964 270 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 45 269 - -
Bva03g01964 270 SUPERFAMILY RING/U-box 208 266 - -
Bva03g01964 270 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 45 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01964 Bva-Chr3 17642940 17650502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01964 45 269 C3H Transcription Factor Family AT5G15790 61.039 7.53e-95 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01964 - - gmx:100777068 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01964 03 17642940 17650502 Bva03g01964 03 17642940 17650502 ECH