Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva03g01961 | ATGGTATCAAGCAACATGGATCCTCCCCCTTGTGCCAATGGCTGTGGCTTCTATGGCTCTGCTGCAAACCAGAACTTGTGCTCAAAGTGCTACTATGATCTTCTCaaagaaaagACACACCCAACTCCAACTCATGTTTCCATTAATCTTGAATCTTCCATTGCTAATCTATCGTTGCCAAGTGCTCGTGATATTGAGAATGCTGCCGCTGTTGCTGTCACTGCCTCTGCCTCTGAAGAGAAGACAAAGAAGAACAGGTGCAAGAACTGCAACAAGAAGGTTGGGCTAACAGGTTTCCAATGTCGTTGTGGGGATGTGTTTTGTGGAAGGCATAGATACCCAGAAGAGCATGCATGCAAGGTGAACTTGAAGGCCAAAAACTG | 383 | 0.4543 | MVSSNMDPPPCANGCGFYGSAANQNLCSKCYYDLLKEKTHPTPTHVSINLESSIANLSLPSARDIENAAAVAVTASASEEKTKKNRCKNCNKKVGLTGFQCRCGDVFCGRHRYPEEHACKVNLKAKN | 127 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva03g01961 | 127 | ProSiteProfiles | Zinc finger AN1-type profile. | 81 | 127 | IPR000058 | GO:0008270 | |
| Bva03g01961 | 127 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 11 | 45 | - | - | |
| Bva03g01961 | 127 | SMART | A20_3 | 8 | 32 | IPR002653 | GO:0003677|GO:0008270 | |
| Bva03g01961 | 127 | Pfam | A20-like zinc finger | 10 | 31 | IPR002653 | GO:0003677|GO:0008270 | |
| Bva03g01961 | 127 | Gene3D | - | 61 | 127 | IPR035896 | - | |
| Bva03g01961 | 127 | Gene3D | - | 3 | 56 | - | - | |
| Bva03g01961 | 127 | SUPERFAMILY | AN1-like Zinc finger | 75 | 124 | IPR035896 | - | |
| Bva03g01961 | 127 | PANTHER | ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED | 8 | 125 | - | - | |
| Bva03g01961 | 127 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 8 | 125 | - | - | |
| Bva03g01961 | 127 | ProSiteProfiles | Zinc finger A20-type profile. | 5 | 39 | IPR002653 | GO:0003677|GO:0008270 | |
| Bva03g01961 | 127 | SMART | AN1_Zf_4 | 87 | 124 | IPR000058 | GO:0008270 | |
| Bva03g01961 | 127 | Pfam | AN1-like Zinc finger | 87 | 120 | IPR000058 | GO:0008270 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva03g01961 | Bva-Chr3 | 17627018 | 17627465 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bva03g01961 | 11 | 125 | C2H2 Transcription Factor Family | AT3G52800 | 35.252 | 4.75e-23 | 86.7 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva03g01961 | - | - | zju:107405257 | 128.642 |