Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01953 ATGTTAAGTTTAGCTGCAAAATATGTTAGAGTGGGATTGACGGAGCAAAAGGCATATGGTAGACTTGGTCATCCACAGATTAGACTAATGGACTGCAAGTCTTCTCAGAAGAGAATGGATGGAAAAAGTGAAGGACCTCCAATTGGGATAGATCTGGGAACAAGCTATTCATGCGTTGGGGTGTGGCTCAACAATGGGGTGGAAATCATACCCAACGACCAAGGCAAAAGAATTACTCCATCCTGTGTAGCCTTCACATGCACCGAAAGGTTCATTGGAGATCTTGCTGAGAATCGGGCTGCCATGAACCCAACCAACACTGTATTTGGTAATTA 335 0.4418 MLSLAAKYVRVGLTEQKAYGRLGHPQIRLMDCKSSQKRMDGKSEGPPIGIDLGTSYSCVGVWLNNGVEIIPNDQGKRITPSCVAFTCTERFIGDLAENRAAMNPTNTVFGN 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01953 111 Gene3D - 29 111 - -
Bva03g01953 111 Pfam Hsp70 protein 48 109 IPR013126 GO:0005524|GO:0140662
Bva03g01953 111 SUPERFAMILY Actin-like ATPase domain 47 110 IPR043129 -
Bva03g01953 111 ProSitePatterns Heat shock hsp70 proteins family signature 1. 50 57 IPR018181 -
Bva03g01953 111 PRINTS 70kDa heat shock protein signature 74 86 - -
Bva03g01953 111 PRINTS 70kDa heat shock protein signature 46 59 - -
Bva03g01953 111 PRINTS 70kDa heat shock protein signature 96 104 - -
Bva03g01953 111 PANTHER HEAT SHOCK PROTEIN 70KDA 47 109 IPR013126 GO:0005524|GO:0140662
Bva03g01953 111 PANTHER OS05G0460000 PROTEIN 47 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01953 Bva-Chr3 17545255 17545836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01953 39 109 Calmodulin-binding Proteins AT3G12580 73.239 1.13e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01953 K03283 - csin:114277576 110.923