Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01952 ATGATAATGGCTAGAAATGATGAGGGACCTGCGGTGGGAATAGACCTGGGCACCACATACTCCTGCGTGGGAGCATGGAAGAACAATGGTGTTGAGATTATCATAAATGAATTAGGGCAAAGAACGACGCCGTCTTTTGTTGCCTTCAAAGACTCCAAATGGCTGATTGGCAATGCTGCCAAGAACCAGGCTGCCATGAACTCAACTAACACAATATTTGatGCAAAAAGGCTACTTGGTAGGAGATTTAGCGATAAGTTTGTTCAGGCTGATGTAGAGGGGTGGCCATTCAAAGTCATTGCCAATGCTGATGATAAACCTAAGATTGTTGTAACTTGTGGGAATGAGAAAAAGCAATTTTATGCTGAGGAAATCTCATCTATGCTCTTAATAAAGATGCGTGAGATTGCAGAAGCTAAATTgggaaaaattgtaaaaaatgcAGTTGTTACTGTACCTGCTTACTTTAATAACTCACAACGCCAAGCTACCAAAGATGCTGGTACTATTGCTGGGCTTAATATTTTGCGAATAATCAATGAGCCAACTGCAGCGGCCATTGCATATGGCCTTGACAAGAAAGATACTTTTGATGGTGAAAGAAATGTTTTCATCTTTGATCTTGGAGGTGGTACTTTTGATGTTTCTCTCCTTAAAATAAATGGGGACACATTTAAAGTTTTGGCCACTAATGGAGATACTCACCTTGGAGGAGAGGACTTCGATAGCAAACTGGTGAACCACTTTGTACGGGAGTTCAGGAGAAAGCACGATGAGGACATTAATGGAAATGCAAGAGCTCTTAGGAGATTGAGAACTGCATGTGAGAGAGCAAAGAGGGAACTCTCATCTGTTGATGAGACTGACATCCAGATAGATTCTTTGTATAATGGTATTGACTTTGTTACAACAATCACTCGTGCTAGGTTCGAGGAACTAAACATGGAGCTCTTCATGAAGTGTATGGAGCCTGTAAAGAAGTGTCTTAGTGATGCAAAGGTGGACAAGAACAGTGTCCATGATGTTGTCATCGTTGGTGGTTCTACTAGGATACCCAAAATCCAGCAGTTATTGCAGGACTTTTTTGATGGAAAAGAGCTCTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTCTGGTGCTGCTATCATGGCTGCTAAGTTGACTGGTCAAGGAAGTAAAGAGGTCAAAAACTTGTCCCTGTTGGATGTTACTCCCCTTTCCCTAGGTATATATGTTAATGGAGATATCATGAGTGTAGTAATTCCTCGAAATACTACTGTTCCCACAAAGATGCAGGAAACTTACACGACAGTTGAAGATAATCAAACCAACATGCGAATTTGGGTTTATGAGGGTGAGAGAAAAGTAGCAACTGCTAACAATTTGCTGGGAGAGTTTACACTTTCAGGCATTACCCCTGCTCCCTGTCATGTTAACAAGGTGGAAGTTGCATTTGACATTGATGCTAATGGTATCTTAAAAGTCTCTGCTGAGGAAATATCCACTAATAACAAGAAGGAGATCACAATAATTAATGACAAAGGAAGACTGACAGAGGAAGAAATTGATAAGATAATTCGAGAAGCTGAGAAATTCAAGGCTCAAGATGATGCACACAAGAAGAAAGTTGAAGCGAAGAATGCTTTGGAGAATTACGCATACAAAATGAGGAATGCTATAAACGATGAGAAGATTAGTTCAGAGCTTTCCCCAGAAGACAAGAAGAAGATAGAGGATACGATCGAGGATGCCATAAAGTGGATTGATGCCAATCAGCTTGCGGAAGCAGATGAGTACAAGTATACAACGAAGGAACTTGGGAGCATCTGTCAGCCAATTCTACTCAAACTGTTTCAAGATAAGGATGGCGTTGATAGTGACGAGGACCATGATGCACCTCCTTCTGGTTCTCGTCGACGGTATTCTACTGCAAAAAGATTGGCAACGGTTCTTTTGAAGGTAACCTTTTCAGCCGTTACGGGTGATATTCCTGGGATGGTTTCTGCAttcatttcata 2021 0.4097 MREIAEAKLGKIVKNAVVTVPAYFNNSQRQATKDAGTIAGLNILRIINEPTAAAIAYGLDKKDTFDGERNVFIFDLGGGTFDVSLLKINGDTFKVLATNGDTHLGGEDFDSKLVNHFVREFRRKHDEDINGNARALRRLRTACERAKRELSSVDETDIQIDSLYNGIDFVTTITRARFEELNMELFMKCMEPVKKCLSDAKVDKNSVHDVVIVGGSTRIPKIQQLLQDFFDGKELCKSINPDEAVASGAAIMAAKLTGQGSKEVKNLSLLDVTPLSLGIYVNGDIMSVVIPRNTTVPTKMQETYTTVEDNQTNMRIWVYEGERKVATANNLLGEFTLSGITPAPCHVNKVEVAFDIDANGILKVSAEEISTNNKKEITIINDKGRLTEEEIDKIIREAEKFKAQDDAHKKKVEAKNALENYAYKMRNAINDEKISSELSPEDKKKIEDTIEDAIKWIDANQLAEADEYKYTTKELGSICQPILLKLFQDKDGVDSDEDHDAPPSGSRRRYSTAKRLATVLLKVTFSAVTGDIPGMVSAFIS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01952 541 SUPERFAMILY Actin-like ATPase domain 1 61 IPR043129 -
Bva03g01952 541 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 413 492 IPR029048 -
Bva03g01952 541 Gene3D - 1 254 - -
Bva03g01952 541 PRINTS 70kDa heat shock protein signature 207 223 - -
Bva03g01952 541 PRINTS 70kDa heat shock protein signature 239 259 - -
Bva03g01952 541 PRINTS 70kDa heat shock protein signature 347 363 - -
Bva03g01952 541 PRINTS 70kDa heat shock protein signature 266 285 - -
Bva03g01952 541 PRINTS 70kDa heat shock protein signature 16 36 - -
Bva03g01952 541 PRINTS 70kDa heat shock protein signature 79 89 - -
Bva03g01952 541 Gene3D - 415 489 IPR029048 -
Bva03g01952 541 Gene3D Actin; Chain A, domain 4 105 188 - -
Bva03g01952 541 Gene3D - 62 236 - -
Bva03g01952 541 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 499 - -
Bva03g01952 541 PANTHER HEAT SHOCK PROTEIN 70KDA 1 499 IPR013126 GO:0005524|GO:0140662
Bva03g01952 541 Pfam Hsp70 protein 1 485 IPR013126 GO:0005524|GO:0140662
Bva03g01952 541 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 261 414 IPR029047 -
Bva03g01952 541 Coils Coil 136 156 - -
Bva03g01952 541 ProSitePatterns Heat shock hsp70 proteins family signature 2. 73 86 IPR018181 -
Bva03g01952 541 SUPERFAMILY Actin-like ATPase domain 66 258 IPR043129 -
Bva03g01952 541 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 263 419 IPR029047 -
Bva03g01952 541 ProSitePatterns Heat shock hsp70 proteins family signature 3. 210 224 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01952 Bva-Chr3 17540373 17542202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01952 1 488 Calmodulin-binding Proteins AT3G12580 70.082 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01952 K03283 - gmx:100787543 710.294