Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01949 ATGGTTGAGCAAGCTGACTTAGTTATCATTGGTGTCACTGTTGGCGTGGCCCTTGGACTTTTGATAGCTTGCCTCTTATTTTTTGGCATAAGGTGGTACAAGAAACGTGCTCATCTTAGCCGATGTACGAATGAGCGTAGTTCAAGTGTAACAACTCTTCCAATACGCACAAATGGATTAGGAACGAGCACTGACTTTAGCGACACTACCACAATTTCTATACCCACTTCAAGGACAGAAATTCTGCAGGAAAAATCCCATTTCTCTTGGTGgaatcataaaaagaaagatcagTTTGCTTCAGCATCAGGAATTCTTAAGTACTCATACAAAGACATTCAAAAGGCTACACAAAATTTCACAACTGTCCTGGGAGAAGGATCATTTGGTGTTGTTTATAAAGCTACGATGCCTTCAGGAGAGGTGGTAGCTGTGAAGGTGCTCGCTCCCAATTCCAAACAAGGGGAAAAGGAGTTTCAAACAGAGGTGCTTCTGCTTGGAAGACTGCATCATCGGAATCTTGTAAATTTGGTAGGATTCTGTGTAGATAAAGGACAACGCATACTTGTTTACGAGTTCATGAGCAATGGAAGTTTAGAAAAGCTACTGTATGATGAAGAACAGGATTTGAGTTGGGATGATAGGCTGCAAATAGCTGCTGATATTTCTCATGGAATTGAGTACCTTCACGAAGGAGCAGTTCCTCCAGTTATACATCGCGATTTAAAATCCGGCAATATACTGTTGGATCACACAATGAGAGCTAAGGTTGCTGATTTTGGGCTCTCAAAGGAAGAGGTTTTTGATGATAGGAACTCTGGCCTTAAGGGTACATATGGCTACATGGACCCAGCATACATCTCCTCAAACAAATTCACAATGAAGAGTGACATTTATAGTTTTGGCATTATCATTTTTGAGCTCATCACTGCCATACACCCACATCAAAATTTGATGGAATACATTAATCTCGCTGCAATGGATCATAATGGTATAGATGAGATTCTTGACAAGCAACTTGTGGGGAAATGCAACATTGAAGAAGTGAGGCAGCTAGCTAGAGTTGCACACAAATGCTTGCACAAATCACCTAAGAAACGCCCCTCTATTGGAGAGGTTTCCCAGGGTATACGGAGGATAAAGCAACGGCGGCTTGCGAAAGAAAATACCTTGTCATTTGCAGGGAGGAGTTTTAGTAACTTGTCTCGAGCATTTAGTCGAATAGAGGATCAACAAGTTGAGTTGAGTAGAAGAAACAGCATGAACCAGAGAGCAGCATG 1280 0.4117 MVEQADLVIIGVTVGVALGLLIACLLFFGIRWYKKRAHLSRCTNERSSSVTTLPIRTNGLGTSTDFSDTTTISIPTSRTEILQEKSHFSWWNHKKKDQFASASGILKYSYKDIQKATQNFTTVLGEGSFGVVYKATMPSGEVVAVKVLAPNSKQGEKEFQTEVLLLGRLHHRNLVNLVGFCVDKGQRILVYEFMSNGSLEKLLYDEEQDLSWDDRLQIAADISHGIEYLHEGAVPPVIHRDLKSGNILLDHTMRAKVADFGLSKEEVFDDRNSGLKGTYGYMDPAYISSNKFTMKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMDHNGIDEILDKQLVGKCNIEEVRQLARVAHKCLHKSPKKRPSIGEVSQGIRRIKQRRLAKENTLSFAGRSFSNLSRAFSRIEDQQVELSRRNSMNQRAA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01949 426 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Bva03g01949 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Bva03g01949 426 Gene3D Phosphorylase Kinase; domain 1 82 193 - -
Bva03g01949 426 Gene3D Transferase(Phosphotransferase) domain 1 194 397 - -
Bva03g01949 426 Pfam Protein tyrosine and serine/threonine kinase 120 374 IPR001245 GO:0004672|GO:0006468
Bva03g01949 426 SMART serkin_6 118 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01949 426 SUPERFAMILY Protein kinase-like (PK-like) 89 374 IPR011009 -
Bva03g01949 426 ProSiteProfiles Protein kinase domain profile. 118 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01949 426 CDD STKc_IRAK 124 375 - -
Bva03g01949 426 PANTHER OS01G0750732 PROTEIN 9 423 - -
Bva03g01949 426 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01949 Bva-Chr3 17521938 17524888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01949 104 373 Receptor kinase-like Gene Family AT3G19300 42.652 2.36e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Bva03g01949 PK_Tyr_Ser-Thr 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01949 - - gmx:100819995 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01949 03 17521938 17524888 Bva04g00410 04 2429513 2432659 BWGD
Bva03g01949 03 17521938 17524888 Bva03g01949 03 17521938 17524888 ECH