Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01947 ATGGGAATGACTCAGTTCATCATTTTCTCCTTCACTTTCTTCCATTTGCTATCACCAATTTACACTTTACCTCTTGCACCTGCTCTCTACGTTTTTGGGGATTCATTGTTTGACAGTGGAAACAACAACGTGCTACCCACTtttgccaaagcaaattacTTGCCTTATGGTGCTGATTTCCAGAAGGGTGCCACTGGAAGATTCACTAATGGCAGAAACGTTGCTGATTTCATAGCTGAGTTTCTTGGATTGCCATATCCTCCACCATACATGAGTTTAAGACATTTAGAGTCGTTAACTGGAATCACTTATGCATCTGGCTCTTGTGGAATTCTACCAGAAACTGGTACAACATATGGAAAATGCCTAAATTTGAAGGAGCAGATTAACTTGTTTCAGAAAACAGTAGAGAGGACATTACCCACAAAGCTGAGAAACTCAAACCAGTTATCTGAACATTTGTCAAAATCCATTTATGTTTTCTCAATAGGCAGCAATGACTACATCAACAACTACCTTGAAAACAAGTTTTTTGACACAAGCAAGCGTTACACCCCTCAGTCATTTGCTCAACTCCTTATTGGCAGGCTTTCCCAGCAATTAGagAGATTACACAACTTGGGAGCTAGGAAGGTTATAATGTTTGAAATAGGACCCATAGGGTGTATCCCATCAATCTCAAGGAAATATAAACACTCAGGTCAATGTTTGGaggaaataaatcaaatggtgTCATGCTTCAACCAGAGGCTCCCTGCAACGCTAAAAAGACTGACATCAAGTCTCCCAGGCTCAATCTTTGTCCTAGGTCGCGCCAATTCTCTAGGCTATAACGCAATTCAAAACCCTtccaattatgGCTTGGTAGATGGAAGCAATCCATGCTGCACTACTTGGGGTAATGGGACTTCAGGCTGTATTCCATTGTCAAAACCATGCCAAAACCCTAATGTACACTTCTTTTGGGATGCTTTTCATCAAACAGAGACTGTGTATTCAAAGATAGCCACTCAGTGTTTCAATGGTACATCAATTTGCACACCGTCACATAGCCATCTGCGATTCCGGCGACTCAGAACAAGATCCGATGGGGGGAAGCTAGAGGAGGACGACGTAGAGGATCTCGACTTTTTGCTGCCGCCGCGGCAGGTGATAGGTCCAGATGAGAACGGGATAAAGAAGGTGATTGAGTACAAATTCGATGAAGATGGCAATAAGGTGAAGATTACTACCACCACTCGCGAGCTCGCTAATGCTCGCCTCAGTAAGCGTGCCCTTGAGAGGCGATCCTGGGCTAAGTTCGGTGATGCTGTTCGCGAGGATGTTGGTAGCAGGCTCACCATGGTTTTCACTGAGGAAATCCTCCTCGAGCGACCTAGGGCTCCAGGTAGCAAGGCAGAGGAACCAAAGGCTGCTGGAGACCCATTGGCTCAATTCCAGAAAGGTGGTGGTGCTGTTCTCATGGTTTGTAGGACTTGTGGTAAGAAGGGTGATCACTGGACATCAAGGTGTCCTTACAAGGATCTTGCCCCACCAGCCGAAGGGTTTGTTGATAAGCCTGCTTCAGCAGAAGCTGGAACTGCTGCTTCTGGTTCCAAAGCATATGTTCCTACTGGTTTGAGAGGAGGAGTTCAAGATAGGTCCGGCTCAGACATGCGAAGAAGGAACGACGAAAATTCTGTCCGGGTCACCAACCTCTCTGAGAATACAAGAGAGCCCGATTTGCTTGAGCTGTTCCGTCCTTTCGGTGCAGTGAGCAGAGTCTATGTTGCTGTTGATCAGAAGACTGGCATGAGCAGAGGATTTGGTTTTGTTAACTTTGTAAACAGGGAAGATGCACAGAGGGCCATTAACAAGCTCAATGGATATGGTTACGACAATCTCATCCTTAGAGTTGAATGGGGGACGCCAAGaacaaacta 1922 0.4433 MGMTQFIIFSFTFFHLLSPIYTLPLAPALYVFGDSLFDSGNNNVLPTFAKANYLPYGADFQKGATGRFTNGRNVADFIAEFLGLPYPPPYMSLRHLESLTGITYASGSCGILPETGTTYGKCLNLKEQINLFQKTVERTLPTKLRNSNQLSEHLSKSIYVFSIGSNDYINNYLENKFFDTSKRYTPQSFAQLLIGRLSQQLERLHNLGARKVIMFEIGPIGCIPSISRKYKHSGQCLEEINQMVSCFNQRLPATLKRLTSSLPGSIFVLGRANSLGYNAIQNPSNYGLVDGSNPCCTTWGNGTSGCIPLSKPCQNPNVHFFWDAFHQTETVYSKIATQCFNGTSICTPSHSHLRFRRLRTRSDGGKLEEDDVEDLDFLLPPRQVIGPDENGIKKVIEYKFDEDGNKVKITTTTRELANARLSKRALERRSWAKFGDAVREDVGSRLTMVFTEEILLERPRAPGSKAEEPKAAGDPLAQFQKGGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPAEGFVDKPASAEAGTAASGSKAYVPTGLRGGVQDRSGSDMRRRNDENSVRVTNLSENTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWGTPRTN 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01947 640 Gene3D - 521 640 IPR012677 -
Bva03g01947 640 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 361 639 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bva03g01947 640 MobiDBLite consensus disorder prediction 527 559 - -
Bva03g01947 640 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Bva03g01947 640 Pfam GDSL-like Lipase/Acylhydrolase 29 336 IPR001087 GO:0016788
Bva03g01947 640 Pfam Eukaryotic translation initiation factor 3 subunit G 383 509 IPR024675 -
Bva03g01947 640 Gene3D SGNH hydrolase 25 344 IPR036514 -
Bva03g01947 640 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 559 637 IPR000504 GO:0003723
Bva03g01947 640 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 363 640 - -
Bva03g01947 640 Coils Coil 409 429 - -
Bva03g01947 640 SMART rrm1_1 560 633 IPR000504 GO:0003723
Bva03g01947 640 CDD eIF3G 390 508 IPR024675 -
Bva03g01947 640 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 363 640 - -
Bva03g01947 640 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 561 627 IPR000504 GO:0003723
Bva03g01947 640 CDD RRM_eIF3G_like 560 634 IPR034240 -
Bva03g01947 640 SUPERFAMILY RNA-binding domain, RBD 548 639 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01947 Bva-Chr3 17493884 17500921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01947 365 638 Eukaryotic Initiation Factors Gene Family AT3G11400 66.990 6.41e-137 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01947 K03248 - gmx:100777774 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01947 03 17493884 17500921 Bva03g01947 03 17493884 17500921 ECH