Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01927 ATGCAaagttttttcatttcaagGTTAATTGCTTCAAAACCATGGAGGAACTCGACCCAATTGGGTTTTCTCACCCAGaatgctttccttttcctaaATTCGTTCACATGCAAACCTAATTTCCAATTGCGAGAAAATAATTCGTTTACTGTGTCATACCTCATCGATTCTTGTGGGTTGTCTCCCACAGCGGCTGTTCAAGCATCCAAATTCGTACGATTTGAAAACCCTGATAAACCCAACTCGGTTCTTAGTATTCTTAGAAACTACGGGCTTTCAGAAATCCAGTTATCCAAACTTGTAAAGACTAGTCCAAAAGTGCTTGTAGCAGATTCGGAGACAACCCTTTTGCCCAAAATGAAGTTTTTACAGTCTATTGGGGTTTCAAACAGTGATCTCCCCGAAATTCTTGCGGTTAACCCTGTTCTCTTATTCAGGAGCTTAAATAAATGTCTTATCCCTCTTTATAGAGTTCTTAAAAGTGTACTCTCTAACAATGAGGAAGTAATTAAAGCCTTTAAATTCGGATATTGGCATTATAGTAAAGGAGATATGGATAATATAGTTACAAACATAAAGCTTTTGAGAGAAGTTGGAGTGCCTCAACGTTTTGTTTCTCACCTGGTAACTTGTTATCCGAGTGTGGCTTTCTTCAAACATGCAAAGTTTGATGAAGCTGTCAAGTCAGTTTTGGAAATGGGATTTGATCCTTCAAAATCATCGTTTATCACTGCTATCAATGTTCTTGTGAAACTGAGGCAACCACTGTGGGAATCAAGATTGAAGACTTTCGAGAGGTGGGGTTGGTCAAGGGAAATGGCTCTTTCAGCATTCAAAAAGTTTCCAAAGTTTATGATAACCTCGGAAGAGAAGATTGGAAAGGTGATGCATTTCCTTGTGAATGAAATGGGTTATGCACCAGAAGACATTGCTCGTTTACCAGTTGTTGTTACTTTAAGCTTAAAGAAGAGGATTATCCCTAGATGTTCTGTTGTTCAGACTCTGAAATCTAAGCATTTGCTTAAGAATGATTTGCGCCTAGGcggtttcattattttatctgAGAAAAAGTTTTCTGAGTGCTTTGTGAGCAGATTAGCGGGACCCTG 1109 0.3715 MQSFFISRLIASKPWRNSTQLGFLTQNAFLFLNSFTCKPNFQLRENNSFTVSYLIDSCGLSPTAAVQASKFVRFENPDKPNSVLSILRNYGLSEIQLSKLVKTSPKVLVADSETTLLPKMKFLQSIGVSNSDLPEILAVNPVLLFRSLNKCLIPLYRVLKSVLSNNEEVIKAFKFGYWHYSKGDMDNIVTNIKLLREVGVPQRFVSHLVTCYPSVAFFKHAKFDEAVKSVLEMGFDPSKSSFITAINVLVKLRQPLWESRLKTFERWGWSREMALSAFKKFPKFMITSEEKIGKVMHFLVNEMGYAPEDIARLPVVVTLSLKKRIIPRCSVVQTLKSKHLLKNDLRLGGFIILSEKKFSECFVSRLAGP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01927 369 Gene3D Transcription termination factor 3, mitochondrial 57 178 IPR038538 -
Bva03g01927 369 Gene3D Transcription termination factor 3, mitochondrial 179 366 IPR038538 -
Bva03g01927 369 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 24 365 - -
Bva03g01927 369 Pfam mTERF 84 236 IPR003690 GO:0003690|GO:0006355
Bva03g01927 369 Pfam mTERF 250 358 IPR003690 GO:0003690|GO:0006355
Bva03g01927 369 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Bva03g01927 369 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Bva03g01927 369 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Bva03g01927 369 SMART mt_12 206 236 IPR003690 GO:0003690|GO:0006355
Bva03g01927 369 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Bva03g01927 369 PANTHER CGI-12 PROTEIN-RELATED 24 365 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01927 Bva-Chr3 17358740 17360115 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva03g01927 mTERF 5.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01927 K15032 - qsu:111998476 346.28