Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01926 ATGGCCGAATCCTCCAACTCCGAGCTTCCTCACCCTCTTATCATATCAGAAGATTCTGAAGAATCACATCCAAATGGTTCATTATATCCCTCTGATAAAATGAATATCGAGGATTCCTCTCACTCCTTCGACCCTTTCACACCTGAAATATATTTCGACCACAGAAGCAACCATGCGGATTTGTACTCTGATTCGGACACCGATTCGGTGAGTTGCTTTGTCACAGATCTTTTTGAAAGCCACTCCTCCCAGCTATCTCGCCATTGCTGTGAATGTGATGATGGGTCTGACATAAATCCCTTTTCTGGAGTTGTTTTGGATGATGATGGGGGAGAAGGGTTTAATAATTATTCCGAGGAATTAGAGTTAGGGTTTGGgtttgaaaataatgatgGGGTTGGTGAGAATTTGAGTTCAGAACGGGTTAATTTGCATGGAGATGGCCTTAGGGTTGTTGGGTTCAATTCTGATTCGGATTCCAATAGTGTGGATGAGTTTGACAGGGATATGGAATTGTATTCTGGGGAGAATCATGATAATAGAAATAGTGAGtttgatgattttgatgttCGTATGTATTGTGATAGGCTTTGTTTGGAGGATCAAAGGATCCTCAATGAAACTTTGGAATGGGAGGAAATACTGGAAAGGGTCAATGAGAGCTTTGTGATTGACGAGGTTGATGATCGTTCAGTAGCATCTGGACTTTATAATGTAGAAGAAACAGAAGATGCACTGAGATACCTTGAATGGGAAATTCTGATGGCAGTTAACAATTTAGAGAGGAATATGGAGTTGGAAAATGATGGCTACATACACCCAGCTGAATATGATGTTCTTTTGGGGCAATTTGTGGAAAATGATAGTGCCTCAAAGGGTAGTCCGCCTGCGGCAAAAAGTGTTGTGGAGAGTCTCCCTCTTGTGGAATTAACAAAGGAGGACTTGCAGGGAAGGAATGTAGCATGTGCCATTTGCAAAGATGAGATCTTATTAGAGGAGAAGGTGAGGAGGCTTCCCTGCTCACACTGTTATCATGGAGATTGCATCATGCCATGGTTGAGCATTCGAAATACATGCCCTGTTTGTCGGTTTGAGTTGCCCACAGACGATCCTGATTATGAGCATAGGAAGAGTCAGAGAACTGCTCTTGCTCTTTTGGAGCTTTCAGGGCAGATGCAATTTTG 1184 0.4172 MAESSNSELPHPLIISEDSEESHPNGSLYPSDKMNIEDSSHSFDPFTPEIYFDHRSNHADLYSDSDTDSVSCFVTDLFESHSSQLSRHCCECDDGSDINPFSGVVLDDDGGEGFNNYSEELELGFGFENNDGVGENLSSERVNLHGDGLRVVGFNSDSDSNSVDEFDRDMELYSGENHDNRNSEFDDFDVRMYCDRLCLEDQRILNETLEWEEILERVNESFVIDEVDDRSVASGLYNVEETEDALRYLEWEILMAVNNLERNMELENDGYIHPAEYDVLLGQFVENDSASKGSPPAAKSVVESLPLVELTKEDLQGRNVACAICKDEILLEEKVRRLPCSHCYHGDCIMPWLSIRNTCPVCRFELPTDDPDYEHRKSQRTALALLELSGQMQF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01926 394 CDD RING-H2_RNF126_like 322 363 - -
Bva03g01926 394 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 59 190 - -
Bva03g01926 394 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 286 394 - -
Bva03g01926 394 SUPERFAMILY RING/U-box 306 370 - -
Bva03g01926 394 Pfam Ring finger domain 322 363 IPR001841 -
Bva03g01926 394 SMART ring_2 322 362 IPR001841 -
Bva03g01926 394 ProSiteProfiles Zinc finger RING-type profile. 322 363 IPR001841 -
Bva03g01926 394 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 286 394 - -
Bva03g01926 394 MobiDBLite consensus disorder prediction 20 34 - -
Bva03g01926 394 MobiDBLite consensus disorder prediction 1 34 - -
Bva03g01926 394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 369 IPR013083 -
Bva03g01926 394 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 59 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01926 Bva-Chr3 17355697 17357282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01926 148 391 C3H Transcription Factor Family AT3G02340 38.909 2.37e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01926 - - gmx:100812037 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01926 03 17355697 17357282 Bva03g01926 03 17355697 17357282 ECH