Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01925 ATGCAGGCCAGGGAGGTTGCAGCACTCAACTATCTTCTCCCTTCAAACCCATCTCCATACCCATCTCATTACAGTGCCTTCCAAACCAACCTACCCACATTTCAATTCCAAAGATTCTCTAATCAACTCTATGGTTTCCAAAACTACCCTTCTAAAGTTCAAGACTTTAGCCCACAATCATCTGGTATCAGCAGCAACTCAACTTCTGATGAGGCAGATGAACAGCAACAGGGCCTCATCAATGAGAGGAAACACAGAAGAATGATATCAAACAGAGAATCAGCTCGCCGATCGCGCATGAGAAAGCAGAAGCACCTTGATGAGCTGTGGTCACAGGTGGTTTGGCTCAGAAATGAGAATCACCAGCTTATTGATAAGCTGAATCATGTATCAGAGTGCCATGAAAAAGTGCTTAAAGAGAATGCTCAGCTTAAAGAGGAAGCTTCTGATCTTCGCCAAATGTTGAGTGACATGCAGCTACACAGTCCTTGCCCTCCCTTGAGCCCTTTGGAAGACATCGATGGCAGCTCTGCCATCACAACTTCCTTTGAACTCCTTGGCTG 563 0.4565 MQAREVAALNYLLPSNPSPYPSHYSAFQTNLPTFQFQRFSNQLYGFQNYPSKVQDFSPQSSGISSNSTSDEADEQQQGLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSECHEKVLKENAQLKEEASDLRQMLSDMQLHSPCPPLSPLEDIDGSSAITTSFELLG 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01925 187 MobiDBLite consensus disorder prediction 55 100 - -
Bva03g01925 187 CDD bZIP_plant_GBF1 84 134 IPR045314 GO:0003700|GO:0006355
Bva03g01925 187 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Bva03g01925 187 MobiDBLite consensus disorder prediction 55 75 - -
Bva03g01925 187 Pfam bZIP transcription factor 83 141 IPR004827 GO:0003700|GO:0006355
Bva03g01925 187 Gene3D - 81 137 - -
Bva03g01925 187 MobiDBLite consensus disorder prediction 76 100 - -
Bva03g01925 187 Coils Coil 134 161 - -
Bva03g01925 187 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Bva03g01925 187 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 178 IPR044521 -
Bva03g01925 187 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Bva03g01925 187 SUPERFAMILY Leucine zipper domain 83 132 IPR046347 GO:0003700|GO:0006355
Bva03g01925 187 PANTHER BZIP TRANSCRIPTION FACTOR 1 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01925 Bva-Chr3 17343255 17343818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01925 18 163 bZIP Transcription Factor Family AT3G30530 63.758 9.35e-54 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva03g01925 bZIP_1 1.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01925 - - aprc:113863596 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01925 03 17343255 17343818 Bva04g00422 04 2521936 2522502 BWGD
Bva03g01925 03 17343255 17343818 Bva03g01925 03 17343255 17343818 ECH