Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva03g01917 | ATGTTGAAACAAGAAGGTGGTGGGGATGGTGATGGCGGCTGCAATAACGGGCCACATATCTGTGACTCATGTCGTGCCGCGGCATGTACAGTATACTGCCGTGCCGACTCGGCATACCTCTGTGTCAGCTGCGACGGCCATATTCATGCCGCTAACCGAGTGGCTTCGCGGCATGAGCGTGTGTGGGTGTGTGAGGCGTGTGAACGTGCCCCGGCAGCATATCTATGCAGAGCTGATGCTGCTTCCCTCTGCGCCACCTGTGACGCCGACATCCACTCGGCAAATCCGCTGGCCAGCCGCCACCACCGTGTCCCAATTCTGCCAATCTCCGGCAGCCTCTATGGGCCCTCAACAACACAGGTGGGTGGCGAAGAGGAGGAAGCCATGGACGAGGAGGATGAAGATGAGGCAGCTTCATGGTTGTTGCTCAATCCTATGAAGAATAGCAACAATCCGTGTAATGGGTTTTTGTTTAATGGTGAAGTTGATGAGTATTTGGACCTTGTGGATTGCAATTCTTGTGGTGATCATATCCAGTTCACTGATCAGTATAACCAGAATCAGCAGCAACAGCATTATGGTGTTCCTCACAAGACCTATGGAGGTGATAGTGTGGTTCCTGTGCAGCAGCAGCAAGCACAGCATTTTCAGCTGGGTTTGGACTTCGAGCCCTCAAAAATGGAAGCTGCCTACAGTTACAATGCTTCCATTAGTCATAGTgTTTCCATCTCATCAATGGATGTTGGAGTTGTACCAGAAGCAACAATGAGTGATGTCTCAATTTCCCATCCAAGACCCTCAAAAGGGACAATTGACCTTTTCTCAGGGCCTCCCCTTCAGTTGCCTTGCCAACTTACACCAATGGACAGGAAGGCCAGGGTCTTAAGATAcagggagaaaaagaagacaagaaaatttgagaagacAATTAGGTATGCTTCAAGGAAAGCCTATGCAGAGACCAGACCTCGCATCAAAGGCAGATTCGCAAAGAGAACCGATGTAGAAGCAGAAGTTGATCAGATGTTCTCCACAAATCTCATGACAGAAGCTGGCTATGGAATTGTTCCCACCTTCTG | 1079 | 0.4847 | MLKQEGGGDGDGGCNNGPHICDSCRAAACTVYCRADSAYLCVSCDGHIHAANRVASRHERVWVCEACERAPAAYLCRADAASLCATCDADIHSANPLASRHHRVPILPISGSLYGPSTTQVGGEEEEAMDEEDEDEAASWLLLNPMKNSNNPCNGFLFNGEVDEYLDLVDCNSCGDHIQFTDQYNQNQQQQHYGVPHKTYGGDSVVPVQQQQAQHFQLGLDFEPSKMEAAYSYNASISHSVSISSMDVGVVPEATMSDVSISHPRPSKGTIDLFSGPPLQLPCQLTPMDRKARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTNLMTEAGYGIVPTF | 359 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva03g01917 | 359 | CDD | Bbox1_BBX-like | 20 | 63 | - | - | |
Bva03g01917 | 359 | ProSiteProfiles | Zinc finger B-box type profile. | 16 | 63 | IPR000315 | GO:0008270 | |
Bva03g01917 | 359 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 4 | 17 | 359 | IPR045281 | GO:0009909 | |
Bva03g01917 | 359 | CDD | Bbox1_BBX-like | 63 | 106 | - | - | |
Bva03g01917 | 359 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 1 | 17 | 359 | - | - | |
Bva03g01917 | 359 | ProSiteProfiles | Zinc finger B-box type profile. | 59 | 106 | IPR000315 | GO:0008270 | |
Bva03g01917 | 359 | ProSiteProfiles | CCT domain profile. | 290 | 332 | IPR010402 | GO:0005515 | |
Bva03g01917 | 359 | Pfam | CCT motif | 290 | 332 | IPR010402 | GO:0005515 | |
Bva03g01917 | 359 | SMART | bboxneu5 | 16 | 63 | IPR000315 | GO:0008270 | |
Bva03g01917 | 359 | SMART | bboxneu5 | 64 | 106 | IPR000315 | GO:0008270 | |
Bva03g01917 | 359 | Pfam | B-box zinc finger | 61 | 106 | IPR000315 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva03g01917 | Bva-Chr3 | 17294159 | 17297320 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva03g01917 | 1 | 359 | C2C2-CO-like Transcription Factor Family | AT3G02380 | 58.537 | 4.40e-141 | 402 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-CO-like | Bva03g01917 | zf-B_box | 5.2e-07 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva03g01917 | - | - | tcc:18601831 | 486.878 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva03g01917 | 03 | 17294159 | 17297320 | Bva04g00430 | 04 | 2566888 | 2569389 | BWGD | |
Bva03g01917 | 03 | 17294159 | 17297320 | Bva03g01917 | 03 | 17294159 | 17297320 | ECH |