Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01916 ATGGGGACACAGAGAAGAGAAACTGTTCTGTGTTTTGTGGCATTTTTCTGGTTTTGGATCTCTACAAATGCTTTGCTTTCTCCTAAAGGAGTAAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAGAATCTCTGGTGGATCCTCATGGTGTTTTAGAaaattgggatggggatgctGTTGATCCGTGTAGCTGGAATATGGTTACCTGTTCTTCTGAGAACCTTGTCATTGGCCTGGGCACTCCCAGTCAAAATTTATCTGGTACTCTATCTGCAAGCATAGGAAATCTAACAAACCTCCAGATTGTGTTGCTTCAGAATAACAACATTACAGGACCACTCCCTTCAGAGCTGGGCAAGCTTTCCAAGCTTCGCACTCTTGATCTCTCTAATAACTTCTTCAATGGAGAAATCCCTCCCTCTCTGGGCCACTTGAGAAGCCTCCAATACCTGAGGCTCAATAATAACACTATTTCTGGGCAATTTCCAGAGTCACTGGCTAACATGACACAACTTGCTTTTCTTGACTTATCCTTCAACAATCTAAGTGGCCCTGTACCTAGAATTTTGGCCAAATCATACAACATTGTTGGAAACCCCCTTGTATGTGCTACggagaaagaaacaaactgCCATGGGATGACACTGATGCCCATGTCTATGAACTTGAACAATACAGAAGATGCTCTACCTTCTAGAAGACCAAAGACTCACAAAATGGCCATTGCCTTTGGCTTGAGCCTAGGATGCCTCTGCCTTATTGTTCTTGGTTTTGGAATATTTCTGTGGTGGAGGCATAAGCGTAATCAGCAGGCATTTTTTGATGTTAAAGACCGGCATCATGAAGAGGTCTACCTTGGAAACTTGAAGAGATTCCAATTCAGAGAACTCCAAATTGCTACTCACAACTTCTGCAGCAAAAACATTCTTGGAAAAGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCTCAGATGGCACTGTTGTAGCCGTCAAAAGGCTAAAGGATGGTAATGCCATTGGTGGAGAGATTCAATTCCAGACTGAAGTTGAACTGATCAGCTTGGCCGTGCACCGAAACCTCCTCAGACTCTATGGATTTTGCATGACACCCACAGAAAGGCTTCTAGTTTACCCATACATGTCTAATGGCAGTGTTGCTTCGCGTCTCAAGGGTAAACCAGCTTTGGACTGGGGCACGAGGAAGCAAATTGCCTTAGGAGCAGCGAGGGGGCTGCTGTACCTTCATGAGCAGTGTGATCCAAAGATAATTCATAGGGATGTGAAAGCTGCCAACATATTGCTCGATGACTATTGTGAGGCAGTAGTTGGAGATTTCGGGTTGGCGAAGCTATTGGATCACCAAGATTCACACGTTACAACTGCAGTGAGGGGCACTGTAGGGCATATAGCCCCTGAGTATCTTTCCACAGGACAATCCTCTGAAAAGACTGATGTTTTTGGATTTGGCATTCTTCTCCTTGAATTGATCACAGGCCAAAGGGCACTAGAATTTGGAAAAGCAGCTAACCAAAAGGGAGCCATGCTTGATTGGGTGAAGAAGCTTCATCAGGAGAAGAAGCTTGAGTTGCTTGTAGACAAGGATCTAAAAAGCAACTATGACAGGATTGAGCTCGAAGAAATGGTTCGTGTGGCTTTATTATGTACTCAATATCTTCCAGGTCACAGGCCAAAAATGTCTGAAGTAGTACGCATGCTTGAAGGGGATGGACTAGCAGAAAGATGGGAAGCTTCTCAAAGAGCTGAATCAACCAAGTGCAAACCCCATGAGTTCTCTTCTTCGGATCGATATTCTGATCTTACTGATGACTCTTCATTACTAGTTCAGGCCATGGAACTTTCAGGTCCTAGGTG 1874 0.4317 MGTQRRETVLCFVAFFWFWISTNALLSPKGVNFEVQALMGIKESLVDPHGVLENWDGDAVDPCSWNMVTCSSENLVIGLGTPSQNLSGTLSASIGNLTNLQIVLLQNNNITGPLPSELGKLSKLRTLDLSNNFFNGEIPPSLGHLRSLQYLRLNNNTISGQFPESLANMTQLAFLDLSFNNLSGPVPRILAKSYNIVGNPLVCATEKETNCHGMTLMPMSMNLNNTEDALPSRRPKTHKMAIAFGLSLGCLCLIVLGFGIFLWWRHKRNQQAFFDVKDRHHEEVYLGNLKRFQFRELQIATHNFCSKNILGKGGFGNVYKGVLSDGTVVAVKRLKDGNAIGGEIQFQTEVELISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPALDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKLHQEKKLELLVDKDLKSNYDRIELEEMVRVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRAESTKCKPHEFSSSDRYSDLTDDSSLLVQAMELSGPR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01916 624 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Bva03g01916 624 SMART serkin_6 304 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01916 624 SUPERFAMILY L domain-like 34 196 - -
Bva03g01916 624 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Bva03g01916 624 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 3 624 - -
Bva03g01916 624 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Bva03g01916 624 Pfam Protein kinase domain 307 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01916 624 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Bva03g01916 624 MobiDBLite consensus disorder prediction 586 604 - -
Bva03g01916 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 3 624 - -
Bva03g01916 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Bva03g01916 624 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Bva03g01916 624 Pfam Leucine rich repeat 143 182 IPR001611 GO:0005515
Bva03g01916 624 MobiDBLite consensus disorder prediction 586 606 - -
Bva03g01916 624 ProSiteProfiles Protein kinase domain profile. 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01916 624 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01916 Bva-Chr3 17282719 17286565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01916 8 624 Receptor kinase-like Gene Family AT5G16000 78.400 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bva03g01916 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01916 - - gmx:100798412 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01916 03 17282719 17286565 Bva04g00431 04 2573487 2577177 BWGD
Bva03g01916 03 17282719 17286565 Bva03g01916 03 17282719 17286565 ECH