Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01885 ATGGCAGGGCCTGCAGCCCCTCCTCCACTTCCAGCCACACCGCCCCCAACCTCTCCACCGCCATCGCCACCAGATTCTCCACCACCATCGCCACCAGCATCTTCACCACCATCACGTCCGGCATCTACCCCGCCGTCACCTATAACATCACTCCCACCATCAGCTACTGCTGCCCCTCCTCCTAACGAGACTTCACCTTCCCCTCCAGATTTATCCCCACCACCTGCAGTAGCAGGTTCTCCCCCTCCCCAACCCTCGGATGTACCCCCTGCCGCAGTTCCACCTCGCTCTCCCCCTAATTCACAGTCTCCTCCCCCTCCTGCTGATGTCCCAACACCACCATCATCCAGTTCCCCACCTCCACCACAGGGAAAGCCACCGAAAAGTACTCCTTCCCCTCCTACAGTTACTCCTCCTCCATCTAGTTCTCGAGCTCCTCCTTCCACAAATGCTCCACCTCCGGCCAAATTGCCATCATCTCCTCCTTTGGCCCCTTCCACACCTTCGTCCTCTTCACCACCGCCGCTTTCTTCACCTGCTTCTCCAACTAATTCATCTACTACTGGGGGCCCAACTGCATCCCTACCCTCTATTCCAACAGAAAAACCCACTGCTAAATCAACTAATGACAGTGATATGACCACAAATGCCCCATCTGGAGGAGGGTTAAAAAATGAAGGAGTTGTGGCTATTGGCATAATTGTTGGTTTTCTCGTCATCAGCCTTCTTGTTATGGCCATGTGGTTtgtacataaaagaaagaagggaagTAGATCAAGAGTTGACTATACTGGACCGTCTCCATTTTCCTCTTCCCAAAGTTCAGATAACTTATTCTTAAGGCCACAATCTCCATCTCCCTTTTTGGGTAGGGCCTCTGGcaatgattatatttattcaCCATCGGAGCCAGGTGGAGCAGGTAATTCAAGGTCATGGTTCACTTATGAAGAACTCGTCCAAGCAACAAATGGTTTTTCAGCAAATAATCTGTTGGGAGAAGGTGGGTTTGGTTATGTCTACAAAGGTCTACTCGCAGATGGAAGAGAAGTAGCTGTGAAACAACTCAAAGTTGGCAGTGGACAAGGGGAGCGTGAGTTCAGGGCAGAAGTTGAGATAATAAGCAGAGTACATCATCGCCATCTGGTTTCTTTGGTTGGTTACTGTATATCTGAGCATCAAAGATTGCTTGTCTACGATGTTGTTCCCAACAATAACCTGCATTACCATCTCCATGGTGCAAACAGGCCAGTTTTGGATTGGGCAACCAGAGTCAAGGTTGCTGCTGGTGCAGCTCGAGGAATAGCTTACCTGCATGAAGACtgTCATCCACGCATTATTCATCGAGACATTAAGTCATCAAACATCCTTCTTGacaacaactttgaagctaaaGTTTCAGACTTTGGGCTAGCAAAGTTAGCATTGGAATTGGATACAAATACACATGTAACCACACGTGTGATGGGAACCTTTGGGTATATGGCACCGGAATATGCTGCAAGTGGGAAATTGACTGAAAGATCTGATGTTTACTCCTTTGGGGTTGTGCTCTTGGAGCTAATTACAGGTCGGAAACCTGTAGATGATTCTCGGCCAGCCGGCGATGAGAGCCTAGTTGAATGGGCTCGACCTCTGTTAGCCAAAGCACTtgacaatgaaaattttgaagtattgGTTGATCCAAGGCTTGAGGAGAGTTATGATAGAATCGAAATGTTTCGAATGATCGAGGCAGCTGCGGCTTGTGTACGTCATTCTTCTGCAAAACGGCCGCGAATGAGTCAGGTTGTGAGGGCTTTAGATTCCTTAGATGAACTTACAGATCTCAACAATGGAATGAAACCAGGCCAAAGTTCAATCTTTGATTCTGCACAGCAAATCCAATCTGCACAAATCAGAATGTTTAGGAGAATGGCTTTTGGCACCCAAGATTGCAGTACAAGTTTCTTCAATGATTCTCACAGTAGCTGGGGAAGTAGAGATAGCGGAAGCCAAAGCATAATTTTCCCCCAAAATAGATCTTCAAGGAGTAGAGAGCAAGAGAATCAAAGCAGTTTCTTACCCCAGAAAAGACCTGATTCTGGATCACGGAATGGATG 2102 0.4638 MAGPAAPPPLPATPPPTSPPPSPPDSPPPSPPASSPPSRPASTPPSPITSLPPSATAAPPPNETSPSPPDLSPPPAVAGSPPPQPSDVPPAAVPPRSPPNSQSPPPPADVPTPPSSSSPPPPQGKPPKSTPSPPTVTPPPSSSRAPPSTNAPPPAKLPSSPPLAPSTPSSSSPPPLSSPASPTNSSTTGGPTASLPSIPTEKPTAKSTNDSDMTTNAPSGGGLKNEGVVAIGIIVGFLVISLLVMAMWFVHKRKKGSRSRVDYTGPSPFSSSQSSDNLFLRPQSPSPFLGRASGNDYIYSPSEPGGAGNSRSWFTYEELVQATNGFSANNLLGEGGFGYVYKGLLADGREVAVKQLKVGSGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDVVPNNNLHYHLHGANRPVLDWATRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAKVSDFGLAKLALELDTNTHVTTRVMGTFGYMAPEYAASGKLTERSDVYSFGVVLLELITGRKPVDDSRPAGDESLVEWARPLLAKALDNENFEVLVDPRLEESYDRIEMFRMIEAAAACVRHSSAKRPRMSQVVRALDSLDELTDLNNGMKPGQSSIFDSAQQIQSAQIRMFRRMAFGTQDCSTSFFNDSHSSWGSRDSGSQSIIFPQNRSSRSREQENQSSFLPQKRPDSGSRNG 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01885 700 MobiDBLite consensus disorder prediction 1 180 - -
Bva03g01885 700 SUPERFAMILY Protein kinase-like (PK-like) 308 601 IPR011009 -
Bva03g01885 700 SMART serkin_6 326 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01885 700 MobiDBLite consensus disorder prediction 1 225 - -
Bva03g01885 700 MobiDBLite consensus disorder prediction 652 700 - -
Bva03g01885 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Bva03g01885 700 MobiDBLite consensus disorder prediction 263 280 - -
Bva03g01885 700 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Bva03g01885 700 Pfam Protein tyrosine and serine/threonine kinase 329 601 IPR001245 GO:0004672|GO:0006468
Bva03g01885 700 CDD STKc_IRAK 332 604 - -
Bva03g01885 700 Gene3D Transferase(Phosphotransferase) domain 1 402 621 - -
Bva03g01885 700 ProSiteProfiles Protein kinase domain profile. 326 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01885 700 Gene3D Phosphorylase Kinase; domain 1 306 400 - -
Bva03g01885 700 MobiDBLite consensus disorder prediction 181 221 - -
Bva03g01885 700 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 55 653 - -
Bva03g01885 700 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 55 653 - -
Bva03g01885 700 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01885 Bva-Chr3 17060397 17066752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01885 217 649 Trihelix Transcription Factor Family AT1G70460 57.543 5.96e-177 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva03g01885 PK_Tyr_Ser-Thr 8.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01885 - - gmx:100784873 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01885 03 17060397 17066752 Bva03g01885 03 17060397 17066752 ECH