Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01879 ATggtctttatatttaaacagGCCACTTCGCAGGTTCTATTAACAGCCTTGTTTTTCCTTGTAACAATATATACGCCCCATGCCGATAGTTCTTCTAGAGCagcttcttttgcttttgctcctgctgcagaagaaaacaatgaagcAAATGCACTAGTAAAGTGGAAAGCCAGCCTTGAAAAACAAAGCCAAGCTCTTCTATCTTCTTGGAAAGGTACTAGTCCTTGCAATTGGGATGGGATTACTTGTGATGCGTCCAATTCTGTCTCCTCCATAATCCTTCAGCACCTTGGACTAAGAGGTATGCTTTACAGTCTCAGCTTTAAATCTTTTCCCAACCTCCACAAAATGGATATAAGCAACAACTCATTTTATGGAATTATTCCCCACCATATCGGTAACTTGTCAAGTATTTTTTACTTGGACCTCGCTGATAACTTATTCAGTGGCTCTATACCTGAAGAAATAGGATACTTGGTAGGTTTGGAACAACTCAACCTTTCCAACAACAAGCTCTCTGGAGCAATTCCTTTCACCATTGGAAACTTGACACAGCTTAGTATATTGCGCTTGAGCACAAATATGCTATTTGGAACCATCCCATCTTCCATAGGAAACATGATCAATCTGAATGAGCTTGACCTTTctgaaaataaactttttggATCAATTCCTTCCACTATTGGAAATTTGACAAAGCTCACTACATTGTACTGGCATACAAACAAACTTTATGGGTCCATTCCATTTTTCATAGGAAACTTGATTAATTTGAATGACCTTGACCTTTCCCAAAACAATTTCTCAGGACCAATTCCTTCAAGTATTGGTAACTTGACAAAGCTCACTCGATTGCACTTGTTTAATAATATACTCTCTGGATCCATCCCGTCTTCAATGGGAAACATGATAGATTTGAGTGAGTTTTTCCTTTACGAAAACAAACTCTCTACTCCAATTCCTTGCAGCATTGGGAACCTGACAAAACTCACTGCATTGTACTTGTACACAAATAGTCTTTCTGAATCAATTCCATTTTCCATAGGGAACATGATCAATTTGAATGAGCTTGACCTTTCCGAAAATAATCTCTCAGGTCCAATCCCTTCTAGTATTGGAAACTTAACAAACCTCACTATATTGTGCTTgttcaaaaataaactttttggAACAATTCCATTTTCCATAGGAAACTTGATTGATTTGAATGTACTTTCCCTTCGTGGAAACAAACTCCATGGTGCAATTCCTTCTAGTATTGTGAATTTGACAAAGCTCACTACATTGTACTTGTTCACAAATAGTCTTTCTGAATCAATTCCATTTTCCATAGGGAACATGATCAGTTTGAATGAACTTGTCCTTCATGAAAACAAACTCTTTGGTCCAATTCCTTCTAGTATTGGAAACTTGACAAAGCTCACTGTATTGTCTTTGTACATGAATGAACTTTCTGGACCAATCCCATCTTCCATATCAAACTTGGTTGATTTGAATATCCTTAGCCTTTGCCAAAACAAACTCTCTGGACCaattccttttgcttttgggAACTTGACAAAGCTCACTCAGTTCTTCTTGTACTCAAACACAATTTCTGGACCAATTCCTTCCAACATTGGGAACTTGAGAAGGCTTAGATCCTTAATTGCTTTTAATAACTCTCTTAGTGGTCCAATTCCAAGTAGCTTGAAAAATTGTACAGATCTTGTTAGAGTTAGGTTGGACGATAACCAATTTTCAGGGGATATAACATATGCATTTGGTGTATATCCAAGTTTATACTACATTGATTTGAGTGACAACAAGCTTTCTGGCAAGCTTTCCCCAAATTGGGGGAAGTGCCATAATCTTACAAGCCTCAAAATCTCCAACAACAACTTATATGGTGGCATACCACCTAATCTAGCTGAAGCAACCCAGCTACAggtactttttctttcctcaaaTCATCTAACCGGCATGATTCCAAAAGAATTGGGCAAGTTGACATTGTTGATTGAACTCTCTTTGAGcaacaataaattttcagGTAATATTCCCATTGAAATTGGATCATTAGTCAAACTTGAACGTTTGGAGTTGGCAGTTAACAACTTAAATGGCTCTATCCCAAAACAACTTGAAGGGTTGCTCCGTTTAAGGAACTTGAATTTGAGTAGGAACTTATTCGAGGAAAGCATTCCCTATGAGTTAGGCCAATTGCAATCTCTTGAAAATCTAGATCTTAGTTGCAACTTGTTAATTGGAACAATACCAGCAGCACTTGGGCAAACTCCACGCTTGGAAACATTGAACCTATCACATAACAATCTCTCAGGTGCCATTCCATCCAGTTTTGATGACATGACGAGTTTGACTTCCATTGACATATCATATAATCATTTGGAGGGACCACTTCCAGACATTCCAGCGTTGCGTAATGCTACAACTGCAGTATTGAGAAATAATGAAGGCCTATGTGGTAATGTCTCTGGCTTGATGCCCTGTCCATCAGTTCAGCATGAAAAGAGCCACAAAATCATGTTATTAGTTCTACTCCTTACTTTGGGTGCATTAATGCttgtattttttgtatttggaGTTTCATATGTTCTCCGTCGTGgtgtaagaaataaaatgaatgagCATAGTGAAGCACAAAGTCAAAATGTTTTCTCCCTATTGAGttttgatggaaaaattgCATATGAAAATATCATTGAAGCCACTGAGGAATTCAACAACAAATATCTCATTGGGGAAGGAGGGAGTGCTAGTGTTTACAAAGTCCAGTTGCCTAATGGTCAAGTCGTTGCTGTGAAGAAATTTCACTCGATTGCAGATGATGAAATTCTCCATTCAAAAGCATTTACAAGTGAGATTCAAGCCTTAACTGGAGTCAGGCATCGAAACATTGTAAAACTATATGGGTTTTGTTTACATTCAAGGTTCtcatttttagtttatgaGTTCTTTGAAGGAAGCAGCTTGGATAAGATACTCGACAATGAGACACAAGCAATTGCATTGGATTGGCATAAACGAGTGAACATTGTTAAAGGTGTGTCTAATGCTTTATCATATATGCACCATGGTTGCTCACCACCAATAGTTCACCGTGACATATCAAGTAAAAACATTCTTTTAGATTTGGAATATGAGGCTCACATCTCAGACTTTGGAACGGCCAAGTTTCTAAAGGCTGactcatccaactggacctcATTTGCAGGCACCTTTGGTTATGTTGCTCCAGagCTAGCttacacaatgaaagtgaacGAGAAATGTGACATTTTTAGCTTTGGAGTACTGACTTTGGAGATACTCATGGGGAAGCATCCGGGAGATGTCATTTCTTCATTGTCATCATCTTTATCAATAACTTGTAATTTAGCATTGAAGGATTTGTTAGATCCAAGGCTTCCTCATCCTGTGAACCCAATTGCTGAGGAGGTGATCTTGATTGCAGATATAGCGTTTGCTTGCTTGAATAAAAGTTCACATTCTCGTCCAACCATGGATCAAGTGGCTAAGGAATTACTCATGCCCAAATCAACTTCACTGGACCAGTGCCAGGAGATCACTCTTGAACAACTTCAACTGAAAGATTG 3596 0.3587 MVFIFKQATSQVLLTALFFLVTIYTPHADSSSRAASFAFAPAAEENNEANALVKWKASLEKQSQALLSSWKGTSPCNWDGITCDASNSVSSIILQHLGLRGMLYSLSFKSFPNLHKMDISNNSFYGIIPHHIGNLSSIFYLDLADNLFSGSIPEEIGYLVGLEQLNLSNNKLSGAIPFTIGNLTQLSILRLSTNMLFGTIPSSIGNMINLNELDLSENKLFGSIPSTIGNLTKLTTLYWHTNKLYGSIPFFIGNLINLNDLDLSQNNFSGPIPSSIGNLTKLTRLHLFNNILSGSIPSSMGNMIDLSEFFLYENKLSTPIPCSIGNLTKLTALYLYTNSLSESIPFSIGNMINLNELDLSENNLSGPIPSSIGNLTNLTILCLFKNKLFGTIPFSIGNLIDLNVLSLRGNKLHGAIPSSIVNLTKLTTLYLFTNSLSESIPFSIGNMISLNELVLHENKLFGPIPSSIGNLTKLTVLSLYMNELSGPIPSSISNLVDLNILSLCQNKLSGPIPFAFGNLTKLTQFFLYSNTISGPIPSNIGNLRRLRSLIAFNNSLSGPIPSSLKNCTDLVRVRLDDNQFSGDITYAFGVYPSLYYIDLSDNKLSGKLSPNWGKCHNLTSLKISNNNLYGGIPPNLAEATQLQVLFLSSNHLTGMIPKELGKLTLLIELSLSNNKFSGNIPIEIGSLVKLERLELAVNNLNGSIPKQLEGLLRLRNLNLSRNLFEESIPYELGQLQSLENLDLSCNLLIGTIPAALGQTPRLETLNLSHNNLSGAIPSSFDDMTSLTSIDISYNHLEGPLPDIPALRNATTAVLRNNEGLCGNVSGLMPCPSVQHEKSHKIMLLVLLLTLGALMLVFFVFGVSYVLRRGVRNKMNEHSEAQSQNVFSLLSFDGKIAYENIIEATEEFNNKYLIGEGGSASVYKVQLPNGQVVAVKKFHSIADDEILHSKAFTSEIQALTGVRHRNIVKLYGFCLHSRFSFLVYEFFEGSSLDKILDNETQAIALDWHKRVNIVKGVSNALSYMHHGCSPPIVHRDISSKNILLDLEYEAHISDFGTAKFLKADSSNWTSFAGTFGYVAPELAYTMKVNEKCDIFSFGVLTLEILMGKHPGDVISSLSSSLSITCNLALKDLLDPRLPHPVNPIAEEVILIADIAFACLNKSSHSRPTMDQVAKELLMPKSTSLDQCQEITLEQLQLKD 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01879 1198 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 320 473 - -
Bva03g01879 1198 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 161 329 - -
Bva03g01879 1198 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 272 399 - -
Bva03g01879 1198 Gene3D Ribonuclease Inhibitor 45 199 IPR032675 -
Bva03g01879 1198 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 383 1181 - -
Bva03g01879 1198 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 320 473 - -
Bva03g01879 1198 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 161 329 - -
Bva03g01879 1198 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 25 198 - -
Bva03g01879 1198 Gene3D Phosphorylase Kinase; domain 1 867 985 - -
Bva03g01879 1198 Pfam Leucine rich repeat 737 796 IPR001611 GO:0005515
Bva03g01879 1198 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Bva03g01879 1198 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1031 1043 IPR008266 GO:0004672|GO:0006468
Bva03g01879 1198 ProSitePatterns Protein kinases ATP-binding region signature. 913 936 IPR017441 GO:0005524
Bva03g01879 1198 SUPERFAMILY L domain-like 189 441 - -
Bva03g01879 1198 SMART LRR_typ_2 471 495 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 207 231 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 255 279 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 519 543 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 159 183 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 759 782 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 351 375 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 711 735 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 423 447 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 783 806 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 663 687 IPR003591 -
Bva03g01879 1198 SMART LRR_typ_2 327 350 IPR003591 -
Bva03g01879 1198 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 383 1181 - -
Bva03g01879 1198 Gene3D Transferase(Phosphotransferase) domain 1 987 1193 - -
Bva03g01879 1198 Gene3D Ribonuclease Inhibitor 305 413 IPR032675 -
Bva03g01879 1198 Gene3D Ribonuclease Inhibitor 414 515 IPR032675 -
Bva03g01879 1198 SMART LRR_sd22_2 255 281 - -
Bva03g01879 1198 SMART LRR_sd22_2 399 425 - -
Bva03g01879 1198 SMART LRR_sd22_2 327 346 - -
Bva03g01879 1198 SMART LRR_sd22_2 639 660 - -
Bva03g01879 1198 SMART LRR_sd22_2 687 713 - -
Bva03g01879 1198 SMART LRR_sd22_2 207 233 - -
Bva03g01879 1198 SMART LRR_sd22_2 519 545 - -
Bva03g01879 1198 SMART LRR_sd22_2 471 497 - -
Bva03g01879 1198 SMART LRR_sd22_2 351 377 - -
Bva03g01879 1198 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 25 198 - -
Bva03g01879 1198 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 272 399 - -
Bva03g01879 1198 SUPERFAMILY RNI-like 488 802 - -
Bva03g01879 1198 Pfam Protein kinase domain 909 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01879 1198 Gene3D Ribonuclease Inhibitor 516 839 IPR032675 -
Bva03g01879 1198 SUPERFAMILY Protein kinase-like (PK-like) 889 1175 IPR011009 -
Bva03g01879 1198 Gene3D Ribonuclease Inhibitor 200 302 IPR032675 -
Bva03g01879 1198 SUPERFAMILY L domain-like 74 249 - -
Bva03g01879 1198 ProSiteProfiles Protein kinase domain profile. 907 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01879 1198 Pfam Leucine rich repeat N-terminal domain 46 84 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01879 Bva-Chr3 17015511 17019450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01879 164 729 Receptor kinase-like Gene Family AT4G08850 38.977 1.25e-95 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva03g01879 Pkinase 4.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01879 - - mtr:MTR_1g040615 1157.13