Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01868 ATGGTCTTCATGATGACGGCCCTGCTTTTCCTTGTGATAATCAATCCACCCCATATTGCTAGTTTTTCGAGAACAGGTTCCTTTGGTTTTTCTCCTGCTgcagaagaaaacaatgaagcAAATGCACTATTAAAGTGGAAAGCCAGCCTTGACAACCAAAGTCAAGCTCTTCTATCTTCTTGGACAGGTACCAGTCCTTGCAAGTGGGTTGGAATTACTTGTGATGTATCCAATTCTGTCTCCTCCATAATCCTTCGGAATTTCGGATTAAGAGGTAAGCTTTATAGTATCAGCTTTTCATCATTTCCCAACCTCCGCAAAATTGATGTAAGAAACAACTCATTTTATGGAAATATTCCCCGTCAAATTGGTAACATGTCCAGTATTTCTTACTTGGACCTTGctgataattttttcactGGCTCCATTCCTGAAGAAATAGGATACTTGGTAGGTTTGAATAAGCTTTACCTTTCCAACAACAAACTCTCCGGAGCATTTCCATTCAATATGGGAAATTTGACACAGCTTACTGAATTGAGTTTGTGTACAAATAGACTTTCTGGATCTATCCCATCTTCCATAGGAAACATGATAGAATTGAGGGAACTTTTcctttatgaaaataaactcTCTGGACCAATTCCTTCCTCTATTGGGAACATGACGAAACTCACTAAGTTGTACTGGTACACCACTAGACTTTCTGGTTACATTCCATTTTCCATAGGAAACATGGTTAATTTGAATGTACTTGATCTTTCCCACAACAAACTCTCTGGACCCATACCATCAAGTATTGGAAACTTGACAAAACTCACAATATTGCACTTGCTTAGAAATAGACTTTCTGGATCAATCCCATTTTCTATAGGAAACTTGATCGATTTGAAAGAACTTGCTCTTTTTCAAAACAAACTCTCTGGAGTAATTCCTTCCGGTGTTGGAAACTTGACAAAGCTTACTTTACTGAGCTTGTACAAAAATAGACTTTCTGGATCAATCCCATCTTCAATATCAAACTTGGTTGATTTGAATATCCTTAGCCTTTGCCAAAACAAACTCTCTGGACCAATTCCTTCGACTATAGGGAACTTGGCAAAGctcatatatttaatcttgtactcaaattcaatttctggACCGATTCCTTCTAATATTGGCAACTTGAGAcagttgaaatattttattgctcATAATAACTACTTAGGCGGTCCAATTCCAAGTGGCTTGAACAATTGGACAAACATTTTTAGAGTTAGATTGGATGACAATCAATTAACAGGAAATATAAGACATGCATTTGGTGTATATCCAAGTTTAGACTACATTGACTTGAGTAACAATAAACTTTATGGCCAGCTTTCCACAAATTGGGGGAAGTGCCATAATCTTACAAGCCTCAAAATCTCCAACAACAACTTATCTGGAAGTATACCTCCAAAACTAGCTGAAGCAATCCATCTACATGTGCTTCGCCTTTCCTCAAATCGTCTAACTGGAAAGATTCCCAAGGAATTGGGAAAGTTAACACTGTTGATTGAACTCTCCTTGAGCAACAATAAGTTTTCGGGTAACATTCCCATTGAAATTGGGTCCTTACTTGAACTTGAAAGTTTAGAGTTGGCAGTTAACAATTTAAGTGGCTCAATTTCAAAACAACTTCAAGGGTTGCTCCGTTTAAGGAACTTGAATTTAAGTAGAAATTTATTGAAGGAAAGTATTCCCTCTGAGTTAGGTCATTTGCaatctcttcaaaatttaGATCTCAGTGGCAACTTGTTGAATGGGACAATACCAATGACACTTGGGCAAGCTCCACGATTGGAAACATTGAACTTGTCACATAACAATCTCTCAGGTGTCATTCCTTCAAGTTTTAATGACATGATGAGCTTGACTTCCATTGATATATCATATAACCAATTAGAGGGATCACTTCCACATATTCCAGCCTTCCGTAATGCTACAATAGAAGtattgagaaataataaagGCTTGTGCGGTAATGTCTCGGGTTTGATCCCTTGTCCAATAGTTCAATATGATTCTAATGATCAAAAGAGCAACAAAATCATGTTACTGATAGTACTCCTTACTTTGGGTGCGTTGATGCTAGTTTTATGTGGCATAGGaattgcatattttctttgttgtggTGAAAGAAACAAACTAAGTGATGTTAGCGAAGCACAAACTCAAAATGTTTTCTCCGTATGGAGTTTTGACGGAAAAAGAGCATATGAAAATATCATTGAAGCCACTGAggaatttaaccaaaaatatctCATTGGGGAAGGAGGGTGTGCTAGTGTTTACAAAGCTCAGTTAGCTGATGGTCAAGTTGTTGTTGTGAAGAAATTTCACTCTTTGCAAGATGGTGAAATGCCCAATTTAAGAGCTTTTACCAGTGAGATTCAAGCCTTGACTGAAATTAGGCATCAAAACATTGTGAAACTATATGGGTTTTGTTCACATTCAAGGTTCTCATTTTTGGTTTATGAGTTCTTGGAAAGGGGAAGCTTGGATAAGGTACTCAGCAATGAGACACAGGCAATTGCATTGGATTGGTACAAGAGGTGGAAAATTATTAAAGGTGTGGCTAATGCTTTATCATATATGCATCATGATTGCTCACCTCCAATAGTTCACCGTGACATATCAAGTAAAAACATTCTTTTAGATTTAGAATATGAGGCTCACATCTCTGACTTCGGAACGGCGAAACTTCTAAAAGCCGattcatccaactggacctcATTTGCAGGCACTTTTGGGTATGCTGCTCCAGAACTAGCATATACAATGGAAGTGAATGAGAAATGTGATGTTTATAGCTTTGGAATGCTAACCTTGGAGATACTAATAGGGAAGCATCCGGGAGATCTGATCTCTTCTTTGTCATCGTCTTTATCAACAACTCGTAACTTTGCATTGAAGGATTTGTTAGATCCACGGCTTTCTCACCCTGTGAACCCAATTGCTGAGGAGGTGATTTTGACGGCAAATATAGCGTTTGCTTGCTTGAATGAAAGTCCACATTCTCGTCCAACCATGGATCAAGTGGCTAAGGACTTCGTCATACCCAAATCAATTACTTG 3101 0.3599 MVFMMTALLFLVIINPPHIASFSRTGSFGFSPAAEENNEANALLKWKASLDNQSQALLSSWTGTSPCKWVGITCDVSNSVSSIILRNFGLRGKLYSISFSSFPNLRKIDVRNNSFYGNIPRQIGNMSSISYLDLADNFFTGSIPEEIGYLVGLNKLYLSNNKLSGAFPFNMGNLTQLTELSLCTNRLSGSIPSSIGNMIELRELFLYENKLSGPIPSSIGNMTKLTKLYWYTTRLSGYIPFSIGNMVNLNVLDLSHNKLSGPIPSSIGNLTKLTILHLLRNRLSGSIPFSIGNLIDLKELALFQNKLSGVIPSGVGNLTKLTLLSLYKNRLSGSIPSSISNLVDLNILSLCQNKLSGPIPSTIGNLAKLIYLILYSNSISGPIPSNIGNLRQLKYFIAHNNYLGGPIPSGLNNWTNIFRVRLDDNQLTGNIRHAFGVYPSLDYIDLSNNKLYGQLSTNWGKCHNLTSLKISNNNLSGSIPPKLAEAIHLHVLRLSSNRLTGKIPKELGKLTLLIELSLSNNKFSGNIPIEIGSLLELESLELAVNNLSGSISKQLQGLLRLRNLNLSRNLLKESIPSELGHLQSLQNLDLSGNLLNGTIPMTLGQAPRLETLNLSHNNLSGVIPSSFNDMMSLTSIDISYNQLEGSLPHIPAFRNATIEVLRNNKGLCGNVSGLIPCPIVQYDSNDQKSNKIMLLIVLLTLGALMLVLCGIGIAYFLCCGERNKLSDVSEAQTQNVFSVWSFDGKRAYENIIEATEEFNQKYLIGEGGCASVYKAQLADGQVVVVKKFHSLQDGEMPNLRAFTSEIQALTEIRHQNIVKLYGFCSHSRFSFLVYEFLERGSLDKVLSNETQAIALDWYKRWKIIKGVANALSYMHHDCSPPIVHRDISSKNILLDLEYEAHISDFGTAKLLKADSSNWTSFAGTFGYAAPELAYTMEVNEKCDVYSFGMLTLEILIGKHPGDLISSLSSSLSTTRNFALKDLLDPRLSHPVNPIAEEVILTANIAFACLNESPHSRPTMDQVAKDFVIPKSIT 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01868 1033 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 228 1028 - -
Bva03g01868 1033 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 105 229 - -
Bva03g01868 1033 SMART LRR_sd22_2 246 272 - -
Bva03g01868 1033 SMART LRR_sd22_2 582 597 - -
Bva03g01868 1033 SMART LRR_sd22_2 318 344 - -
Bva03g01868 1033 SMART LRR_sd22_2 174 200 - -
Bva03g01868 1033 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Bva03g01868 1033 Gene3D Ribonuclease Inhibitor 296 389 IPR032675 -
Bva03g01868 1033 ProSiteProfiles Protein kinase domain profile. 758 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01868 1033 SUPERFAMILY Protein kinase-like (PK-like) 740 1026 IPR011009 -
Bva03g01868 1033 Gene3D Ribonuclease Inhibitor 393 677 IPR032675 -
Bva03g01868 1033 PRINTS Leucine-rich repeat signature 249 262 - -
Bva03g01868 1033 PRINTS Leucine-rich repeat signature 582 595 - -
Bva03g01868 1033 SMART LRR_typ_2 150 169 IPR003591 -
Bva03g01868 1033 SMART LRR_typ_2 510 534 IPR003591 -
Bva03g01868 1033 SMART LRR_typ_2 558 581 IPR003591 -
Bva03g01868 1033 SMART LRR_typ_2 607 629 IPR003591 -
Bva03g01868 1033 SMART LRR_typ_2 366 390 IPR003591 -
Bva03g01868 1033 SMART LRR_typ_2 174 198 IPR003591 -
Bva03g01868 1033 SMART LRR_typ_2 246 270 IPR003591 -
Bva03g01868 1033 SMART LRR_typ_2 102 126 IPR003591 -
Bva03g01868 1033 SMART LRR_typ_2 582 606 IPR003591 -
Bva03g01868 1033 SMART LRR_typ_2 318 342 IPR003591 -
Bva03g01868 1033 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 31 134 - -
Bva03g01868 1033 SUPERFAMILY L domain-like 359 681 - -
Bva03g01868 1033 Gene3D Ribonuclease Inhibitor 189 290 IPR032675 -
Bva03g01868 1033 Gene3D Phosphorylase Kinase; domain 1 721 836 - -
Bva03g01868 1033 Gene3D Ribonuclease Inhibitor 37 188 IPR032675 -
Bva03g01868 1033 Gene3D Transferase(Phosphotransferase) domain 1 837 1030 - -
Bva03g01868 1033 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 31 134 - -
Bva03g01868 1033 Pfam Protein kinase domain 759 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01868 1033 ProSiteProfiles Leucine-rich repeat profile. 608 629 IPR001611 GO:0005515
Bva03g01868 1033 ProSitePatterns Tyrosine protein kinases specific active-site signature. 882 894 IPR008266 GO:0004672|GO:0006468
Bva03g01868 1033 Pfam Leucine rich repeat 607 644 IPR001611 GO:0005515
Bva03g01868 1033 Pfam Leucine rich repeat 103 163 IPR001611 GO:0005515
Bva03g01868 1033 SUPERFAMILY RNI-like 107 542 - -
Bva03g01868 1033 Pfam Leucine Rich Repeat 248 270 IPR001611 GO:0005515
Bva03g01868 1033 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 228 1028 - -
Bva03g01868 1033 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 105 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01868 Bva-Chr3 16884186 16887685 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01868 19 930 Receptor kinase-like Gene Family AT4G08850 44.573 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva03g01868 Pkinase 9.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01868 - - gmx:100811066 1066.6