Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01864 ATGCATGCAAAGGGTTATACACTGGGTTATAGCCGTGGTGATTCACCCAAATATTCTTCATCAAATATCCCAATCCTACCCCTGGTGGGATATTCTGATTTAAGCCATCCATATGTAACAAAACAAGCTGGTTTCTCCACAGACTGGCGCAAGCATCCAGGAGTCAGTTATATTCGCAATTTGActagaaataaaatTGCTGAAATTCTCAGTACCAGTATTAGTTGTGGGCAAGTGCAGCAGGCATCTGATATTGTGGCTATTCTAGAACATCAGCTCTTTATTGATGCCGCTTCTGAGGATGAGTATATGAACCAGGAGACATTGGTACAACGATTGCAAACTCAACTGCATCATAAGTTGCTTGGAACAAAAAACAGTCATCAAGTTGATAGCTCTCTGACTGTGCAATCTTCTGGATTATCGAATGATTGTTATGTAAAAAAACCAGGGGTTGCTTTTCAGAACATGGTAGATGCTAGGATCAATTCCACTAATCACTGCACCATGACAGAAAACAGTACTTATAAATATGGCTTTCGAAAAGGGGGCCTATCTCACCCTTTTGTTGCTCATGAGATAGTTTCTGCTGATGAGAGTTCATCAATCACTACATGCACTGATATAGATggattttctaattttggtGGTTCTGGTGGCTTAAGCAATGTGGAAAGTAGCTCACAATCATTTGGTTCCCATTTTCAGCAGCCACATGTGGATGATGCGGAAATGGATCTGATAAAATATAGAGGTCTTTCGGGCAGTagccagaaaaataaatctgtgGCTTTGCAGACTACAGTGGGAAAGTTCTCACAGTCTGAATCTTTAGATTCATTGATCCCTCAACATTCTCTGACTGAAATTTCTGAAGTTTCTAATCATTTTCCAACCATGAGCTCTAGCTGCCATAGTTCACATCTTCAGGATTTACAGCAACATCAACTAAAGAAGTTTGATATTCGACAGAACTATATTCAACAGAACTCCAAGCATTTGAGGCACCTATATCAGCATTGTGATAACACGTTTATGGCCCAGTCAAGATATGAACCTTGCCATCAAAAACTgggaaaaaaaacatttaagcAGGATCAGCTTCTTTCCAGACATTCAAATAGTGATCAACAATTTGCTTTGGGAAGTTCTGCTTTTCTTAATGGTTCAAGTGGATCTCCCAGTGTCAATTCATGTGGTAGTTCCCAAGTTTATGCTGAATACAAGATCTTGATGGCATATTTCCGCTTCAAGAATTTGAACAATCTTCCAGGGAATAATCAAATTTCCTTCATTAGATATCTGCATTCAAAAGTCTGTGCTAATGGGATTTGTGCTTGTGAACAATATTCTTCGCTGGTATTGCATTTTGATAATTGCCAAAGTGATGATTGCCATATGTGCTGGCCTATAAAACTGTTATGTTTCACCGAAAATATTGGGAATGATTTGGAATTTTCAGATAGCATTTCTGCTATAAGAGATTATGGTGAATGCTTTGGTAATTCTGCAGGCATGCTACAACCTACAAAACGACAAAAAATGGAACCTTCTTTTGGTATCTCTGCAGTCAATAATGAAGTTTCTGATCCATTGGCTCCCAAGATGGCTAAATCTCATTCTCTTGAAGGTCTTTCTGAATTGCATCAACAGCCAGAATCTTCTCTCTCCATTTATTCTGAAGTTACAGAAAATAATGTGGAACAATTTACAAGTCCAATGCTAGATTCTGCATGCATTAGTGGGATGCGCAACAGCTTGGTTGATGACACATTTGAACAGACTTTTGAGAGTGAGACTATTCTTTCTGAACATGTAGAAGGGGTTCATACATCAGAGGAGTTACACCCCAAAAGTCTTAATGTGAAAAACGGAAACTTACAGGAAATGGTTAGTGGATTGAATTCCAGTGTGCATCCTCTCCCAAGTGATCCTAGTAATGATATCAAGGAGTTACAAAGCAGAATTGGGTTTGACCAGACCCAGAAAGAAACTACAGAGAAAGAAGCTGATCTAGAGAAAGTGGCAAAGTTCTCAAATCCAAAAAGAAATCGTGTTTCCTTGGCTGAAAGTTTCACATGTGATCAAATAAGGGAACATATTATGAGTCTTCAGCAGCCATTTGGCCAGAGTACCTCTGGGGGAGAAAGGGGAATTGATGTCAACTCATGCCAACTATGTGCAGACGTTAAGCTTGTATTTGCACCAGTGCCAATCTATTGCTTATGCTGTGGCACTCACATCAAGAGAAATGCACACTATTACTGCCGAAGAGCAGAAGAATTTGATACACAATATTGTTTTTGCACATCTTGCCATAGGGCTTCTCGAGGCGCTTATATAACATTCAATGGGATATCTATTGCCAAGACCATGcttgagagaaagagaaatgatgAGTTAATTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAAGATGGCAACATCAGATATGTGCACTCTTCAACAACAATAGAGATTTGGAAGGCAATGCTGAGTATGTGTGTCCAAGATGCTgtttagaagaaattaataatggaCTTCGAATGCCTTTGCCAGAGTCTGCTACTTTTGGTGCTAAGGACTTGCCAAGGACCTTGCTTAGTAACCATATAGAACAAAGACTTTTCAAGCGTCTCAAGCAAGAGAGAATTGACCGGGCAAATGTGGAAGGAAAGAATGTTGATGAGGTTCCACAAGCAGAAAATCTTGCTGTTAGAGTAGTATTATCTGTGGACAAACAGCTGAAAGTGAAGAAGCAGTTTCTGGACATCTTTTGTGAAGAGAACTATCCTGCTGAGTTCCCTTATAGATCAAAAGTGATTCTTTTGTTTCAGAAGATTGAAGGAGTAGATGTATGCCTTTTTGCAATGCCTCAAAGACAGACTGTGACTGGTGAAGCTCTCCGTACTTTTGTTTACCATCAAATATTGATTGGATACCTTGATTTTTGCAAGAAACGAGGTTTCACAACTTGCTACATATGGGCCTGTCCTCCTTTGAAGGGAGAAGATTATGTACTATATTGCCATCCTGAGTCACAGAAAACTCCAAAAAATGACAAACTGCGGCAATGGTACCAATCAATGCTAAGAAAGGCtgccaaagaaaatattgttgttggttttactaatatatatgatcGATTCTTTGTTCCTACTGGAAAAACTGACTCCAAGGTCTCAGCCGCTCACTTGCCATATTTTGATGGAGATTACTGGTCCGGTGCTGCTATGGATCTAATCAGGAGGATTGAACAAGGGAATGGAGGAGAATATCagaaaaaggtgaaaaaaatCATGACAAAAAGAACTTTAAAGGCCATGGGACATACAAATCCTTCTGAAGGCATTGCCAGGGATATTCTTGTTATGCAAAAGCTTGGCCAAACTATATTACCTGTCAAGGAAGACTTTATGGTAGTCAACTTGCAGTATGCATGCACAGAATGCCATGAAGTGATACTCTCAGGGAAGCGATGGTTTTGCAGTGAGTGTAAGAATTTTCAGCTGTGTGAAAGATGTCATACGGCTGATATACACACTTCGGCTATTGGGGAGAAGCACACGCTCTGCCAGgTCCTCGTGGATGATATCCCTCTTGATACTAAGGAGGATGATATCATCCTAGATAATGGTCTATTTGAGAATAGGCATAATTTTTTGAGCTTCTGCCAAAAGAGTCATTATCAGTTTGACACACTCCGGCGTGCCAAGCATTCCTCAATCATGATCCTCTATAATCTCAAGAATCCGACACTGCTGCCTGCTGGGAAAATATGTAGCATTTGCTGTCAAGACACAGTGTTTCAACAAAGCTGGCAATGTGAGACCTGCCCACAGTTTACCGTCTGTTCAGCATGCTATAGGGAGAGAGGTGCTTCTTGTCATACACATAGGTTGAGTCAATGTGCTTCAACAGCCCTTTGTGAGACAAGGAACAAAGAGTTAAAGCTAAAGTCGGCACTGACCCGGAAATTGCTCGAAGTTTTAAAGCATGCCTCTCAATGTCATTCGACCAGAAGTCAACCATGCTCTTATCCGAACTGTCTTCAAATCAAAAAGCTGTTCTGCCATGCCAGTAGGTGTACTGTTCGAGCTGCCGGTGGTTGCCAACACTGTAAGAAGGCATGGTTGGGACTAAGCATGCACTCAAGGAATTGTAGAGATTCAAACTGTCTCATCCCCCGTTGCATGGATCTGAAAAAGCATGCAGAATGGATAGCAATGCAATCTGAATCTCGGCGAAGAGCTGCAGTTGCAGAATCTGTGAGGGGGAAGCAATA 4289 0.3936 MHAKGYTLGYSRGDSPKYSSSNIPILPLVGYSDLSHPYVTKQAGFSTDWRKHPGVSYIRNLTRNKIAEILSTSISCGQVQQASDIVAILEHQLFIDAASEDEYMNQETLVQRLQTQLHHKLLGTKNSHQVDSSLTVQSSGLSNDCYVKKPGVAFQNMVDARINSTNHCTMTENSTYKYGFRKGGLSHPFVAHEIVSADESSSITTCTDIDGFSNFGGSGGLSNVESSSQSFGSHFQQPHVDDAEMDLIKYRGLSGSSQKNKSVALQTTVGKFSQSESLDSLIPQHSLTEISEVSNHFPTMSSSCHSSHLQDLQQHQLKKFDIRQNYIQQNSKHLRHLYQHCDNTFMAQSRYEPCHQKLGKKTFKQDQLLSRHSNSDQQFALGSSAFLNGSSGSPSVNSCGSSQVYAEYKILMAYFRFKNLNNLPGNNQISFIRYLHSKVCANGICACEQYSSLVLHFDNCQSDDCHMCWPIKLLCFTENIGNDLEFSDSISAIRDYGECFGNSAGMLQPTKRQKMEPSFGISAVNNEVSDPLAPKMAKSHSLEGLSELHQQPESSLSIYSEVTENNVEQFTSPMLDSACISGMRNSLVDDTFEQTFESETILSEHVEGVHTSEELHPKSLNVKNGNLQEMVSGLNSSVHPLPSDPSNDIKELQSRIGFDQTQKETTEKEADLEKVAKFSNPKRNRVSLAESFTCDQIREHIMSLQQPFGQSTSGGERGIDVNSCQLCADVKLVFAPVPIYCLCCGTHIKRNAHYYCRRAEEFDTQYCFCTSCHRASRGAYITFNGISIAKTMLERKRNDELIEEWWVQCDKCERWQHQICALFNNNRDLEGNAEYVCPRCCLEEINNGLRMPLPESATFGAKDLPRTLLSNHIEQRLFKRLKQERIDRANVEGKNVDEVPQAENLAVRVVLSVDKQLKVKKQFLDIFCEENYPAEFPYRSKVILLFQKIEGVDVCLFAMPQRQTVTGEALRTFVYHQILIGYLDFCKKRGFTTCYIWACPPLKGEDYVLYCHPESQKTPKNDKLRQWYQSMLRKAAKENIVVGFTNIYDRFFVPTGKTDSKVSAAHLPYFDGDYWSGAAMDLIRRIEQGNGGEYQKKVKKIMTKRTLKAMGHTNPSEGIARDILVMQKLGQTILPVKEDFMVVNLQYACTECHEVILSGKRWFCSECKNFQLCERCHTADIHTSAIGEKHTLCQVLVDDIPLDTKEDDIILDNGLFENRHNFLSFCQKSHYQFDTLRRAKHSSIMILYNLKNPTLLPAGKICSICCQDTVFQQSWQCETCPQFTVCSACYRERGASCHTHRLSQCASTALCETRNKELKLKSALTRKLLEVLKHASQCHSTRSQPCSYPNCLQIKKLFCHASRCTVRAAGGCQHCKKAWLGLSMHSRNCRDSNCLIPRCMDLKKHAEWIAMQSESRRRAAVAESVRGKQ 1429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01864 1429 Pfam Histone acetylation protein 970 1085 IPR013178 GO:0004402|GO:0006355|GO:0016573
Bva03g01864 1429 PANTHER HISTONE ACETYLTRANSFERASE HAC2 659 1404 - -
Bva03g01864 1429 SMART KAT11_2 891 1156 IPR013178 GO:0004402|GO:0006355|GO:0016573
Bva03g01864 1429 Pfam TAZ zinc finger 1327 1399 IPR000197 -
Bva03g01864 1429 Gene3D TAZ domain 1312 1426 IPR035898 -
Bva03g01864 1429 ProSiteProfiles Zinc finger TAZ-type profile. 1317 1402 IPR000197 -
Bva03g01864 1429 SMART TAZ_2 1319 1400 IPR000197 -
Bva03g01864 1429 SUPERFAMILY RING/U-box 1239 1299 - -
Bva03g01864 1429 Gene3D - 1142 1192 IPR043145 -
Bva03g01864 1429 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 858 1255 IPR031162 GO:0004402
Bva03g01864 1429 ProSitePatterns Zinc finger PHD-type signature. 767 840 IPR019786 -
Bva03g01864 1429 SUPERFAMILY RING/U-box 1124 1192 - -
Bva03g01864 1429 CDD PHD_HAC_like 768 840 - -
Bva03g01864 1429 ProSitePatterns Zinc finger ZZ-type signature. 1149 1176 IPR000433 GO:0008270
Bva03g01864 1429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 793 841 IPR013083 -
Bva03g01864 1429 SUPERFAMILY TAZ domain 1326 1403 IPR035898 -
Bva03g01864 1429 ProSiteProfiles Zinc finger PHD-type profile. 766 843 IPR019787 -
Bva03g01864 1429 SUPERFAMILY FYVE/PHD zinc finger 803 842 IPR011011 -
Bva03g01864 1429 SMART PHD_3 768 841 IPR001965 -
Bva03g01864 1429 PANTHER CBP/P300-RELATED 659 1404 IPR013178 GO:0004402|GO:0006355|GO:0016573
Bva03g01864 1429 ProSiteProfiles Zinc finger ZZ-type profile. 1144 1207 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01864 Bva-Chr3 16848457 16859465 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Bva03g01864 HAT_KAT11 9.8e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01864 K04498 - gmx:102664049 1338.55