Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01858 ATGGAATCTCGCCGAGCTTCACGAGCTGTAATTGACCCGAAGGTACGCCAAGTTGGATTCTTTGCTCCTGGTGCTCCTCCCGAACGGTCCCAGTCGGGTCCACCCGAACCAATTTTCGCTTCCTCTTCTTCGCCTCCTGTTGCTGGTTCGCCCACCGGCAACTCGCTTTCACCGGTGATGATCCCGCCGCCGCGGCATTCTTCGGACAATTTACTTCAGCATACCCGCCCGAGTGCATACCCGGCGGCTTCCCCTCTCGGGGGTGAATCCATTGCTGCTAGCAGCTATAACAACTCGGATTTCTTCCCAGCTCCTATGTCGCCAACGCCGTCAATGTCACCGTCTTCTTATTCGAGCAAGATGGTTGTTGGTGAAGGAGACTTCTTTGATGGCGCGCGATCATCTGGTCGTGGGGGCAGGGGCAATGTTGGGAAGGTGGCATCTTCGTTTCCTCGCGGCGGGTTTGACCTGACAGCTATAAAAGCTAGTCGTGTTCCAGCGAGTGAATTGACGACCGTATCAGTGGTGAATGTGCCCCTTGGGATTCCGGaaaaagaaaaagcagatAAAGGAGGTGGATCAGCAGTGGAGGTAAAAGCTGAAAGACAACCAACAAGTTCGAAACcacagaaagagaaaacaacaaaagctgAAAGACGTGCTCTTCAAGAAGCTCAACGAGCTGCGAAGGCTGATGCTAGAGctGAAGGAAACAAGGTGTCTGGAACAGTTGTTGTGGGCAATGCAAAACAAGCTAAAGCTGCAAAGCCTCCACAAAAGGTTGATACTGCTTCAGTTGCAGGTTCCGAGAAGAAGGGAAGTGACCGTACATTGGAAAAGGACAGAAAGAAAGATGTTCCTCAACCACGCATGCAATATGATGATAAGAGCCGAGTGGAGAAAGCTAAACGCCGTGCTGTGGTAAAACAAACTGAAGCTAGAAACCGAGTTGAGTTGTTCAGACATTTGCCACAGTATGAACATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCCAACTTGATCCCATGCATCCTGCTGTTTACAagGTAGGATTGCAGTATCTGTCTGGAGATGTATCTGGTGGTAATGATCGTTGCGTTGCGATGCTTAAAGCATTTCAACAGGCCATCAAAGACTACAGTGTTCCACCTGAGAAGACTCTTGCAAGAGACCTTACTgcaaaaataagtaattacgTTTCATTTCTTATCGAGTGTAGACCTCTTTCAATCAGCATGGGAAATGCAATTAGATTTCTGAAGAGTCGAATTGCCAAGTTACCGTTGACTCTGTCTGAGTCAGAAGCAAAAACTTTACTTCAGTCAGACATTGACCGTTTTATAAATGAGAAGATAATAATTGCGAACAAGGTAATAGTCAAGCATGCAGTCACAAAAATAAGAGATGGTGATGTTCTTCTTACTTATGGATCATCATCAGCAGTTGAAATGACGCTGTTACATGCACATGAGCTAGGAAAACAGTTCCGTGTTGTGGTAGTTGACTCTCGTCCACACCTAAAAGGGCGACTTTTACTTCGTAGGCTGGTGGAGAAAGGTCTTAGCTGTACTTATACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGAGTTTTCCTGGGTGCTTCATCAGTGTTGTCTAATGGAACTGTTTATTCAAGAGTTGGCACTGCATGTGTTGCAATGGTTGCTCATGCATTCCGTGTGCCTGTCATAGTGTGTTGCGAGGcttataaatttcatgaaaGGGTGCAGCTTGATTCTATATGCTCTAATGAACTAGGTGATCCAGAAGTCATTTCAAAGCTTCCCGGAAGAGAGGATGTTAACTACTTGGATGGTTGGGCAAATACTGAAAACCTGCAACTTCTGAATCTGATTTATGATGCAACACCTTCAGATTATGTGTCAATGATTGTCACAGATTATGGCATGGTTCCTCCCACAAGTGTGCCTGTAATTGTAAGAGAGTACAGGAGAGAACAGTTATGGATATA 2012 0.4448 MESRRASRAVIDPKVRQVGFFAPGAPPERSQSGPPEPIFASSSSPPVAGSPTGNSLSPVMIPPPRHSSDNLLQHTRPSAYPAASPLGGESIAASSYNNSDFFPAPMSPTPSMSPSSYSSKMVVGEGDFFDGARSSGRGGRGNVGKVASSFPRGGFDLTAIKASRVPASELTTVSVVNVPLGIPEKEKADKGGGSAVEVKAERQPTSSKPQKEKTTKAERRALQEAQRAAKADARAEGNKVSGTVVVGNAKQAKAAKPPQKVDTASVAGSEKKGSDRTLEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFQLDPMHPAVYKVGLQYLSGDVSGGNDRCVAMLKAFQQAIKDYSVPPEKTLARDLTAKISNYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESEAKTLLQSDIDRFINEKIIIANKVIVKHAVTKIRDGDVLLTYGSSSAVEMTLLHAHELGKQFRVVVVDSRPHLKGRLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPEVISKLPGREDVNYLDGWANTENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYRREQLWI 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01858 670 MobiDBLite consensus disorder prediction 272 301 - -
Bva03g01858 670 MobiDBLite consensus disorder prediction 204 234 - -
Bva03g01858 670 Pfam Initiation factor 2 subunit family 361 653 IPR000649 GO:0044237
Bva03g01858 670 Gene3D - 456 663 IPR042529 -
Bva03g01858 670 MobiDBLite consensus disorder prediction 35 56 - -
Bva03g01858 670 MobiDBLite consensus disorder prediction 181 301 - -
Bva03g01858 670 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 2 670 - -
Bva03g01858 670 SUPERFAMILY NagB/RpiA/CoA transferase-like 318 663 IPR037171 -
Bva03g01858 670 MobiDBLite consensus disorder prediction 1 119 - -
Bva03g01858 670 MobiDBLite consensus disorder prediction 90 119 - -
Bva03g01858 670 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 2 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01858 Bva-Chr3 16810382 16817353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01858 1 670 Eukaryotic Initiation Factors Gene Family AT5G38640 65.985 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01858 K03680 - gmx:100775998 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01858 03 16810382 16817353 Bva03g01858 03 16810382 16817353 ECH
Bva03g01858 03 16810382 16817353 Bva04g00476 04 2843068 2849976 ECH