Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01817 ATGAGTGATACTACGGGGAAGACGTCTTCTTGTTTGGCAATAACTGAGAAGAAGACGCAGAGACCCAGTGGTTGCGTTGGCATTTTCTTTCAGCTCTTTGATTGGAACCGGAGACTTGCCAAGAAGAAGCTATTCTCCAAGAAGCTTCTTCCTGCAGCTCGTGCGAACCATGCTTCTAAGAAGTTcaaaggggaagaaaaaatGCCTAATTCCAAGCTCCACTTGATCGCTAATGAAAATAGTGGAGGTTTCCCAAGTTCCAAAAAAGGTGGGAATCGTAGTGTAGATGTAGTGCAAAAGCATGATATGCGAGTTCCGAGTTTGGTAGCAAGGTTGATGGGTCTAGAGTCTCTTCCAGATGCACAGCGAGATAAGTTTAAGAAAGCTTCGCTTTCTGATCCTTGTGGTAATGTGGGGAAGGAGTCTCTGGATACCCATTGTGAGTCAGATCGGCAACAAGGTGTAAACTTCGAAATGGGGGTTGCAAAGAATGATTCAAGACCTCAAAAGCTTCAGAAAACTGGGAGTTATGACAGAAGGGCAGTGACTAGATTTGGAGCTGAGGCCTTGCAGATTAAGAGTGTTCTGTCACGAGCAAGAAAACACCATAACCATCATAACCCTCAAAAGCTTGTTTCTCCTTTGAAGAGTCCTAGAATTGCTTCTGGAAAGTACGTGTCTCGAAGCTCGAGGTTAATTGGAGCAGCTACTAAGATTTTGGAGCCTGGGCTGCAAGCCACAAGCAGAGCCAAGAGTGCCCTTACATATTCAGGTTCCATGTATCCCCCTAATGATGATATTGTGGAAGCAGGATTGGGAACTAATTCAGCAGATCTACAAAATCAATCTGGTTATGATTCCATTACAGCCAAGCCTTTGATGGGGCAAACTTCTTGCAAAAGTTGTGGTAATTTGCTTGATGTTGGCAAATGCAGGCCAAATGTTGACAGCGAGCCGGCTGTTCTGTTACCTGTTAATTCTGATGTGATCACTGCCCCTTCTATGGTTTCAGTGCAGAGGAAGGCTAGGCCAGTCATGGCCTCTCATGAAGAAGGAAGAGATGTTCTTCCGCAAAGTCAGGAACATGTCATACCTCTTATTGCTGAAGTGGGAAGAAGTAATAACCAGTGGTCTAATGAACCCACTAGAAGAACAATGCCTTTGCCTCGTGAATGTCTTGCTCCATGGAATTCATCACACCAACCTTGTAGAACCTTAGAAGATGACACTTGTTCTGTCGGCTTCAAGCACAACGCTCAAACACAAGATCAGGTGAAAGTCAGTGATAGAATTTTACCTGGATCAAGAGTAAGGAATCAGCAAGTGAAAAGAGTATCATCAGCTACAAACACTGTTAGTGGGACCAAAGACTTTGTTGCTTTGAATAGAACTCTTAGTGGTCGAACCAGGATGAGGGCACCCaccaagttggataattccaAGTTTGACTTAGAGAGGAAGCCTTGTACCAGACAGGATGATTCCTTGTCTCGAGTAAGGACattggaaaggaaaaggaggaCCCCGAACATGACACAAGTTGAAACTGCAGATTCTCTCTGTTCAACTACAGCAAGGCAGAGAAATATTCGTTCTGATGCACAGGGTGGTAAGAGGAAGGAACAAAATGCCTGCTCGACCACCAGTACCAATATCAAAAGTAAACGAGGTGGACAgggaaaaatagagaaaattaatgattataaGGTCAATGATGTAGTTTCGTTTGCATTTAATTCCCCCTTGAAGCATAAGAGTGGAATCCACACAGAAAATGTAGAGAAAAGCAATGGTAGGGAGACAAAGACATATTTTCAGAAACCTTTACCCTTGACAGGAGATGCTTTGGGTGCCTTCCTAGAACAGAAATTGAAGGAGTTGACCTCCCAAGAAGATGAGGAATTGGCTACAGGTGCTCCTCCTAAGAGAACAATTGCCATGATTCTTCAAGAGCTAATTACTGCACTAAGTGCAGAGCATCTGACCTGTCATGATGGTCAAACGGTCAATGCCAGTATTGGATTCCATGATGGGGCGGAAAAAGAAAGGTTAGAGGGAGTGTCTTCCGATGATAATCATTTTAGTCCTGGATGTGTGCTGgaagcttctttttcttctagcAGTCTGGATGAAAGCTCAGGGCAAGGATTCCATCCCGACTGTATGAATTGCTGCTATGATCAACAGCAGCAGCTGGAACCAGATGCTGAGCTTTTAGATTCTGCAACATCATATAACGAAGGGAAAAGGATAGGTGGTGAATCATTGACTTGCCTCGTTGACAATGTTTCTGGGATACTacaaagtttaagtttttctaGAGTAAGATTAACAAGAAGCAAGCTTAACTATGTGAAAGATGTTATCTTGGATGCTGAATTGTTGCTTGGAGATGCCACCATACGTGGCGAGGACGGAGTGCCTCATCTGTTTGTTTCTTGGTTTCTCCTTGATGAACTGGACACTCTTGCCGATAATGCTACGTGTTTGGATTTGATTGGTGTTGCGGATTTAGAGGGCTCTAAGGAGGGAAGCCTACTTAAGGGGTTTCTCTTCGATTGTGTTATAGAATATCTAGAAGCAAATTGTTGTCGATATTCTAACTGTGGATTCAGGGCATGGACAAAGCTACCTTTGTGCATGAAAGCTGATATGTTGATTCAAGAGGTTAAGAGAGAGATTAAGAAGTGGGCATGCATAACTGGTATGAACCGTGATGATATGATAGAATTGGAAATGAGCCGCTCCTTGGGGAAATGGAcagattttgatattgaagCATTTGAGGCTGGTGTTGAAATTGATGGGTTCATACTTGAAGTTTTGCTTGATGAAGTTGTTGTAGACCTGGTAGATTGGAAGCAAGACTTcagttg 2876 0.4159 MSDTTGKTSSCLAITEKKTQRPSGCVGIFFQLFDWNRRLAKKKLFSKKLLPAARANHASKKFKGEEKMPNSKLHLIANENSGGFPSSKKGGNRSVDVVQKHDMRVPSLVARLMGLESLPDAQRDKFKKASLSDPCGNVGKESLDTHCESDRQQGVNFEMGVAKNDSRPQKLQKTGSYDRRAVTRFGAEALQIKSVLSRARKHHNHHNPQKLVSPLKSPRIASGKYVSRSSRLIGAATKILEPGLQATSRAKSALTYSGSMYPPNDDIVEAGLGTNSADLQNQSGYDSITAKPLMGQTSCKSCGNLLDVGKCRPNVDSEPAVLLPVNSDVITAPSMVSVQRKARPVMASHEEGRDVLPQSQEHVIPLIAEVGRSNNQWSNEPTRRTMPLPRECLAPWNSSHQPCRTLEDDTCSVGFKHNAQTQDQVKVSDRILPGSRVRNQQVKRVSSATNTVSGTKDFVALNRTLSGRTRMRAPTKLDNSKFDLERKPCTRQDDSLSRVRTLERKRRTPNMTQVETADSLCSTTARQRNIRSDAQGGKRKEQNACSTTSTNIKSKRGGQGKIEKINDYKVNDVVSFAFNSPLKHKSGIHTENVEKSNGRETKTYFQKPLPLTGDALGAFLEQKLKELTSQEDEELATGAPPKRTIAMILQELITALSAEHLTCHDGQTVNASIGFHDGAEKERLEGVSSDDNHFSPGCVLEASFSSSSLDESSGQGFHPDCMNCCYDQQQQLEPDAELLDSATSYNEGKRIGGESLTCLVDNVSGILQSLSFSRVRLTRSKLNYVKDVILDAELLLGDATIRGEDGVPHLFVSWFLLDELDTLADNATCLDLIGVADLEGSKEGSLLKGFLFDCVIEYLEANCCRYSNCGFRAWTKLPLCMKADMLIQEVKREIKKWACITGMNRDDMIELEMSRSLGKWTDFDIEAFEAGVEIDGFILEVLLDEVVVDLVDWKQDFS 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01817 958 MobiDBLite consensus disorder prediction 539 556 - -
Bva03g01817 958 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 11 952 - -
Bva03g01817 958 MobiDBLite consensus disorder prediction 528 558 - -
Bva03g01817 958 Pfam DUF761-associated sequence motif 97 124 IPR032795 -
Bva03g01817 958 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 11 952 - -
Bva03g01817 958 Pfam Domain of unknown function (DUF4378) 782 945 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01817 Bva-Chr3 16237338 16242365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01817 8 953 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 32.169 6.60e-98 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01817 - - gmx:100813026 1044.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01817 03 16237338 16242365 Bva03g01817 03 16237338 16242365 ECH