Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01805 ATGAAACCTCTGCTTCTCCCatcatcttctcttttctcgCTTTCGTTTGTTGTATTCGTCTCTATCAATGTTCCCTGTTCCCTCTGTGCTGATGATGAACGGTTTACCAATTGCAATAAGACTGCTAGTTGCGGAAGCATAAGCAACATCAAGTACCCCTTCTGGGGATTAGGCAGAGAAAACTACTGCGGCCAGTCGGAAATATTAGAGGTGACATGCGAAAGCGATATTCCGAAGCTGACTATCAGCTCAGTAAAATACAGGATTCTTGATTGGGATCAGAAAAATCTCACAGTTGCTAGGGACGATTTTTGGGAGACTTTTTGCCCAAGTGATTACAAAAACTCCACCTTTGATGTCCCTATCTTCAAATATATTGACGGGCTTCAAAACTTGACGTTATTCTATCAATGCAAtgatcatttttttcaaatcaataCGCTTCCTTTCCTACTGTGCCCTGGGACAACCACACAATTCAGATACTCAGCCGTGACTCTGAATTTTAGTGCTTTTGGATATTGCAATTATGTTGTTGTTATTCCAATTAATGGATCCCAAGTCCAGGCTGTGATGAGCGGTCAAATCGAGAGTGCAATAAGGTCTGGTTTCGGATTGGAATGGGTCTTAGACAATGAAGAGTGTAACAGTTGCAGTAACTCTGGTGGGGAGTGTGGAAATTATAATGGAGGATTCGCCTGTTTCTGCAGAGATGGGCTTCATCTAAGTTCTTGTCCAGATGGAAAAGTGATTAAACCAGGAAAAGGATCTAACCACAAAGTAATAGGCATTTCTGTAGGAGTTGCAGCCTTTGTAGCCATTCTTCTGGGATGTTTGCTTTGCGGTGTCTTACGACGAAGGAAAAGAATTACTGAAGAGTCCAAAAGTAATGAGCTGTTTGTGCCTCCATCAAGCGGAGGCGGCACTACCTCTACAACTAATACGTCTAAAAGTTTCCCTTCTTATTCATCATCTGATGTTGAGCCAATGCCGAAGAGCTTCTACTATGGAGTTCAGGTGTTTCCTTATGCTGAACTGGAAGAAGCTACTGACAATTTTAACTCTTCTAAGGAACTTGGTGATGGAGGATTTGGCACAGTTTACTACGGCAAGCTCAAAGATGGACGTGTCGTTGCAGTAAAACGCCTCCATGAAAGCAATTTTAAACGTGTTCAGCAGTTCATGAATGAAGTTCAGATCCTAGCAAAAATACGCCATGAGAACTTAGTGGCACTCTATGGATGCACCTCAAGACATAGCCGAGAACTCCTCCTGGTTTATGAATACATCCCTAATGGTACAGTGGCTGATCATGTCCATgAAGCTGTGGACATCCAAAGGACTCGCCTTGATATAAATTTAGCTAACATGGCTGTCTGTAAAATTCAGAACCATAAATTGGAGGAGTTGGTTGATACATCTCTTGGATTCGAAAGAGACCCCGCTGTAAGGCGCATGATAACATCAGTTGCAGAGCTTGCCTTTAGGTGTTTGCAGCaggagagagaaatgagaCCCCCTATGAGTGAGGTTCTTGCAGTCTTGAAAGAAATTCAGAATGAATGGTTTGGTCAACAAGATGCAAAACTAGTGGATATTAGGGAAGATGAAGTTATccctttgaaaaatgtttctcCCCCATTTTCACGTGATTCAGTTGCTGATAACTGGCAGACAGATGTATAGAAGAAGAGTGTAATTTCAACATGTGCCGAGATGCATGTAAGAACTGGTATTTTCCCACAATTTTTCGTgggaaaattacaattttccGTGGAAATTTTGAACTCTTAGGAGATCTTGTAGGTGAATGCTTCAGCAGTGTacatatttgttaatttatataatttcc 1852 0.3952 MKPLLLPSSSLFSLSFVVFVSINVPCSLCADDERFTNCNKTASCGSISNIKYPFWGLGRENYCGQSEILEVTCESDIPKLTISSVKYRILDWDQKNLTVARDDFWETFCPSDYKNSTFDVPIFKYIDGLQNLTLFYQCNDHFFQINTLPFLLCPGTTTQFRYSAVTLNFSAFGYCNYVVVIPINGSQVQAVMSGQIESAIRSGFGLEWVLDNEECNSCSNSGGECGNYNGGFACFCRDGLHLSSCPDGKVIKPGKGSNHKVIGISVGVAAFVAILLGCLLCGVLRRRKRITEESKSNELFVPPSSGGGTTSTTNTSKSFPSYSSSDVEPMPKSFYYGVQVFPYAELEEATDNFNSSKELGDGGFGTVYYGKLKDGRVVAVKRLHESNFKRVQQFMNEVQILAKIRHENLVALYGCTSRHSRELLLVYEYIPNGTVADHVHEAVDIQRTRLDINLANMAVCKIQNHKLEELVDTSLGFERDPAVRRMITSVAELAFRCLQQEREMRPPMSEVLAVLKEIQNEWFGQQDAKLVDIREDEVIPLKNVSPPFSRDSVADNWQTDV 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01805 561 MobiDBLite consensus disorder prediction 297 327 - -
Bva03g01805 561 PANTHER - 441 557 - -
Bva03g01805 561 PANTHER - 9 441 - -
Bva03g01805 561 SUPERFAMILY Protein kinase-like (PK-like) 332 443 IPR011009 -
Bva03g01805 561 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 225 236 IPR000152 -
Bva03g01805 561 ProSiteProfiles Protein kinase domain profile. 353 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01805 561 Pfam Protein tyrosine and serine/threonine kinase 355 442 IPR001245 GO:0004672|GO:0006468
Bva03g01805 561 Gene3D Phosphorylase Kinase; domain 1 325 429 - -
Bva03g01805 561 Pfam Wall-associated receptor kinase C-terminal 169 239 IPR032872 -
Bva03g01805 561 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 441 IPR044652 -
Bva03g01805 561 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 441 557 IPR044652 -
Bva03g01805 561 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Bva03g01805 561 CDD EGF_CA 214 245 - -
Bva03g01805 561 Pfam Wall-associated receptor kinase galacturonan-binding 38 99 IPR025287 GO:0030247
Bva03g01805 561 Gene3D Transferase(Phosphotransferase) domain 1 439 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01805 Bva-Chr3 16144336 16150213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01805 442 559 Receptor kinase-like Gene Family AT1G25390 45.385 1.87e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva03g01805 PK_Tyr_Ser-Thr 2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01805 - - qsu:112011185 355.14