Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01802 ATGTTAAGCTACTCTAGTCTATTTCCATACGAAGTGCTCAAGTTGCTGGTTGATGATGAGATGAAGTTGAAGATATTTATGCGCATCTTTTTCATATTGAGTTGTGGTATCAACGACGAGTCAGACGAGACAGATGAGcaggaaatagaaaatgaagacATGAACCCCTCCcgaatatgtatatatgggTTTCCTCTTCTTGAACGAGGTTTTTTAAATAGGTTCGAGATTAGTTCGTATGTAAAGTTACTTGACATGCTCATTGATCATCCAGAGGATGTCAAGGAGCTTAGGGAGTGTAAAAGTGGGGGACATAGCTTTCGCCTTTGGCAAAGTACACCAGATTCTGTGAATATTACCTCTGTCAGAATGGTGGCAAagaggaaaattttgaattctgcTACTGTTTCGCCTAAAAAACCTGAACTAGATAGAGACTCAGACTTGAGAACCCAGTTGCCTGTAACGCCAGCATCCAAAACCAAGGCTCTCTCCTCCTCACGTTTGAAATCTATATTCTTGCACGATTGGTGGTTGGTGAAGGCTCAAGCAGAGGGATTAGCTGTTGGGGGTGTTGCTTCCACTGaGACGCTGGGAGAAAGAGTATTCTGCTCAACAGTGATTACAAAGAGACATGAGACCAACGTCCTTGAGACAAAAGACGGCATTACAGTTGTCCTCAGTGGTTTCATAAATAGGTCTCGTACATATCAGAATGGCTTCCCATTAGAGATATGTGACGATTTCCTGTTTGGATTCCCACACAACTGGGAAGAGTATACAGCCAAGGGTTTTGGAGAACATACCAATGTGGCTAACGGATTTGGTGACTCAAATACGTGTTCCCAGAAACAGGCAGCATTTTCCATAGATGGAGACCTAACTTATTGCTGGCTACCCAGTAACATCTGCAATGATCTAGTGAAATGGCAGGGAAATGTTTCTGAGGTCTCTGAATTAATTGATACTATGGAACGCAACAATACCATGAACACTACAGAATGCATTCCTAAAGAGGATAACAAAATACTCAAAAGAACTCAGCCAGAGGAGAACCAGATGCACAATGGTGAAAATGAAATCTGCAATGATCCGAGGAAACGCCAGGGAAATGTTTCTCAGCAATCTGAACCAACTGATACTATAGAACATAACAATGCTGTGAAGACTACAGACTGCATTCATAAAGAGGATGTCAGAACCCTCAAGGGATCTCAGCCAAAGGATAACCAGGTGCACAATGTTGAAAATGGTGTCTTGAGTGTTACAAATACAAGACGAGATAAAAGTGGTTGTCAGACAGTGATGAATAGAAATTCTACAACCCCTTGTGGAGAGCATTCTGTAAGCGGATGTAGAACTCCAATTTCCACAACGGAAGAGAAGAAGAGCGTTGGAGAGAAGAAACCTTTAGAGGACGTTGGTGACTCCTGTAGGAGAGTAACAAGAAGCATTTCTAAAAGGAGTCAGAAAACAATGCCTATtgcatcaaaagaaattaaggtgAAGTGTGTTCGTACTCCATTGCCTATtgcatcaaaagaaattaaagtgaaGTGTGTTCGTACTCCTGTGCCTATtgcatcaaaagaaattaaagtgaaTTGTGTTCGTGCTCCAGTTAGACGATCTGCAAGGCTAtgtaatttgagaaaatg 1658 0.3878 MLSYSSLFPYEVLKLLVDDEMKLKIFMRIFFILSCGINDESDETDEQEIENEDMNPSRICIYGFPLLERGFLNRFEISSYVKLLDMLIDHPEDVKELRECKSGGHSFRLWQSTPDSVNITSVRMVAKRKILNSATVSPKKPELDRDSDLRTQLPVTPASKTKALSSSRLKSIFLHDWWLVKAQAEGLAVGGVASTETLGERVFCSTVITKRHETNVLETKDGITVVLSGFINRSRTYQNGFPLEICDDFLFGFPHNWEEYTAKGFGEHTNVANGFGDSNTCSQKQAAFSIDGDLTYCWLPSNICNDLVKWQGNVSEVSELIDTMERNNTMNTTECIPKEDNKILKRTQPEENQMHNGENEICNDPRKRQGNVSQQSEPTDTIEHNNAVKTTDCIHKEDVRTLKGSQPKDNQVHNVENGVLSVTNTRRDKSGCQTVMNRNSTTPCGEHSVSGCRTPISTTEEKKSVGEKKPLEDVGDSCRRVTRSISKRSQKTMPIASKEIKVKCVRTPLPIASKEIKVKCVRTPVPIASKEIKVNCVRAPVRRSARLCNLRK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01802 552 PANTHER INTERACTING FAMILY PROTEIN, PUTATIVE-RELATED 150 464 - -
Bva03g01802 552 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 150 464 - -
Bva03g01802 552 MobiDBLite consensus disorder prediction 460 477 - -
Bva03g01802 552 MobiDBLite consensus disorder prediction 353 380 - -
Bva03g01802 552 Pfam SANTA (SANT Associated) 172 260 IPR015216 -
Bva03g01802 552 MobiDBLite consensus disorder prediction 458 477 - -
Bva03g01802 552 MobiDBLite consensus disorder prediction 366 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01802 Bva-Chr3 16120341 16128556 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva03g01802 SANTA 4.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01802 - - pxb:103929925 163.31