Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01772 ATGGCTTTCTCTATCCCAGCCATGGCAGATATTGATGGTACTTGGTATGATGCTCATGCAACCTTCTATGGTGGCATGTCAGGTCGAGAAACCATGCAGGGGGCTTGTGGATATGGAAATCTCTTCGAGCAGGGGTATGGCCTTGAAACCACAGCACTAAGCACGGCTCTCTTCAACGATGGATACACTTGTGGTGCTTGTTTTGAGATCATGTGCGTGAATGATCCCCAATGGTGCATCCCCAACGGAGGCACAATCAAAGTGACAGCAACCAACTTTTGCCCTCCTAATTACAATGTTGCCAACAGTTGGTGTAACCCTCCACAGAAGCACTTCGATTTGTCCATGCCCATGTTTGCCAAGATTGCCATACCAAAAGCTGGGATCATCCCGGTTCGATACCGGCGAATTGCCTGTGTCAAATCCGGAGGGATTAAGTTTCAGATTACTGGGAACCCTTGGTGGTTACTTGTATTAGTGTATAATGTTGCTGATGCTGGTGATGTTAAGAATGTTAATATCAAAGGTTCTAAGACTGGTTGGATTCGGATGACCAAAAACTGGGGACAGAATTGGCTGACTGGGGCTAATTTGGTAGGGCAAAGCTTGTCATTCCAAGTGACTACTAGTAATGGGAGATGGATACAATTTAATGATGTTGTCCCATGGAATTGGCAATTTAATCAGACCTATGAGGGCAAGTATAACTTCTA 713 0.453 MAFSIPAMADIDGTWYDAHATFYGGMSGRETMQGACGYGNLFEQGYGLETTALSTALFNDGYTCGACFEIMCVNDPQWCIPNGGTIKVTATNFCPPNYNVANSWCNPPQKHFDLSMPMFAKIAIPKAGIIPVRYRRIACVKSGGIKFQITGNPWWLLVLVYNVADAGDVKNVNIKGSKTGWIRMTKNWGQNWLTGANLVGQSLSFQVTTSNGRWIQFNDVVPWNWQFNQTYEGKYNF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01772 237 SUPERFAMILY PHL pollen allergen 141 233 IPR036749 -
Bva03g01772 237 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 154 233 IPR007117 -
Bva03g01772 237 Pfam Lytic transglycolase 50 134 IPR009009 -
Bva03g01772 237 PANTHER EXPANSIN-A21-RELATED 12 237 - -
Bva03g01772 237 Gene3D - 144 237 IPR036749 -
Bva03g01772 237 PANTHER EXPANSIN-A15 12 237 IPR002963 GO:0009664
Bva03g01772 237 Gene3D - 3 139 IPR036908 -
Bva03g01772 237 Pfam Expansin C-terminal domain 145 222 IPR007117 -
Bva03g01772 237 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 33 144 IPR007112 -
Bva03g01772 237 PRINTS Expansin signature 72 83 IPR002963 GO:0009664
Bva03g01772 237 PRINTS Expansin signature 190 211 IPR002963 GO:0009664
Bva03g01772 237 PRINTS Expansin signature 143 155 IPR002963 GO:0009664
Bva03g01772 237 PRINTS Expansin signature 219 235 IPR002963 GO:0009664
Bva03g01772 237 PRINTS Expansin signature 86 96 IPR002963 GO:0009664
Bva03g01772 237 PRINTS Expansin signature 119 132 IPR002963 GO:0009664
Bva03g01772 237 PRINTS Expansin signature 155 176 IPR002963 GO:0009664
Bva03g01772 237 PRINTS Expansin signature 102 119 IPR002963 GO:0009664
Bva03g01772 237 PRINTS Expansin signature 45 59 IPR002963 GO:0009664
Bva03g01772 237 SUPERFAMILY Barwin-like endoglucanases 9 162 IPR036908 -
Bva03g01772 237 SMART dpbb_1 50 134 IPR007112 -
Bva03g01772 237 PRINTS Expansin/Lol pI family signature 32 50 IPR007118 GO:0005576
Bva03g01772 237 PRINTS Expansin/Lol pI family signature 54 72 IPR007118 GO:0005576
Bva03g01772 237 PRINTS Expansin/Lol pI family signature 181 195 IPR007118 GO:0005576
Bva03g01772 237 PRINTS Expansin/Lol pI family signature 127 143 IPR007118 GO:0005576
Bva03g01772 237 PRINTS Expansin/Lol pI family signature 14 29 IPR007118 GO:0005576
Bva03g01772 237 PRINTS Expansin/Lol pI family signature 219 233 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01772 Bva-Chr3 15924724 15925932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01772 11 237 Expansin Gene Family AT5G39300 66.667 4.26e-117 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01772 - - zju:107415875 364.77