Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01762 ATGACGTTGAATTCGGCGATTGAGCTTGGCGTCTTTGATGCCATGGCCAAACAAGGTGAAGGCGCCAAGCTTTCGGCGAAGGACATTGCAGCTAAGCTTTGCAGCAAGAATCCAGAAGCACCCGCAATGCTGGATCGTATCCTTAGGCTTCTGGCAAGTCACTCTGTGGTTTATTGCTCTGTTGCTAAGGATAATCAAGTAGAGATGCTCTACAGTCTCACCCCTATGGCCTCTCAATATTTTGTCACTGATGCCCATGGTGTATCATTTGGGGCCGTGATGAACTTAATTCATGACAATGACAGTCTTCTTGGAAAGCTGGTTTATATTGAAAGGAACAGTTATGGAAGGAGGGATACCATTCAACAGGTTCATGGCATGCATGCCTTTGAGTATCCAAGCTTGGAACTAAGGTTCAATGAAGTTTTCAACAAAGCCGTGTTCAGTTTCACCAATATAATTATGATGAAGATTCTTGAAACATACAAGGGATTGAACATGTGGGAGGAGATATGTTTAAAAGTGTTCCTCAAGGAGATGCCATATTTACGAAGGTGGAAGAATTGCTATGATGCTATTCCTGAGGATGGGAGGGTGATTGTTGTGGACTTCAATCAAGCTGATTTGTTAATGATGACTCAACACATAGTAGGGAAAGAGggaaccaaacaaaaattcttGGAATTGGCAACAACTGCTGGATTTGTTGATGTCAAATTTGTTAGCCATATATGTGGCACATGGGTTATGGAGTTCTTCAAGTA 764 0.4149 MTLNSAIELGVFDAMAKQGEGAKLSAKDIAAKLCSKNPEAPAMLDRILRLLASHSVVYCSVAKDNQVEMLYSLTPMASQYFVTDAHGVSFGAVMNLIHDNDSLLGKLVYIERNSYGRRDTIQQVHGMHAFEYPSLELRFNEVFNKAVFSFTNIIMMKILETYKGLNMWEEICLKVFLKEMPYLRRWKNCYDAIPEDGRVIVVDFNQADLLMMTQHIVGKEGTKQKFLELATTAGFVDVKFVSHICGTWVMEFFK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01762 254 Pfam Dimerisation domain 1 52 IPR012967 GO:0046983
Bva03g01762 254 Gene3D Vaccinia Virus protein VP39 173 254 IPR029063 -
Bva03g01762 254 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 183 254 - -
Bva03g01762 254 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 254 IPR016461 GO:0008168
Bva03g01762 254 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 252 IPR029063 -
Bva03g01762 254 Gene3D Vaccinia Virus protein VP39 140 166 IPR029063 -
Bva03g01762 254 Gene3D - 1 158 IPR036388 -
Bva03g01762 254 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 2 167 - -
Bva03g01762 254 PANTHER O-METHYLTRANSFERASE 2 167 IPR016461 GO:0008168
Bva03g01762 254 PANTHER O-METHYLTRANSFERASE 183 254 IPR016461 GO:0008168
Bva03g01762 254 SUPERFAMILY "Winged helix" DNA-binding domain 1 78 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01762 Bva-Chr3 15830710 15832335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01762 1 254 Monolignol Biosynthesis Gene Families AT5G54160 30.422 1.19e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01762 K13066 - tcc:18589884 193.741