Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01750 ATGTCCGAACAGGCCATCATCCATTTAGGAGCAATTGGGTTGCTTGGAGAGTATTTTCCTTCTTCGAGAATAAAGTACCGACCCTCTACTTCAAGAGTTAGCTGCATGCATCCATCTGCTTCCTGTGACATCCAGTTTGCTTGTGATCTGATCATCATGGCTTTACAAAACATTGGTGCTGGAAACAGCGATGATGCCTTCTACAGGTATAAGATGCCTAAGATGATTACCAAAATTGAGGGGAGAGGTAATGgcatcaaaacaaatatagtCAATATGGTTGACATTGCAAAGGCATTGGCAAGGCCCGCCTCTTACACTACAAAGTATTTTGGTTGTGAGCTTGGAGCCCAATCGAAGTTTGATGAGAAAACTGGAATTTCTCTTGTCAATGGGTCACATGATACTGCAAAACTTGCTGGCCTTCTTGAGAACTTCATCAAGAAATACGTCCAGTGTTATGGTTGTGGTAACCCTGAAACTGAGATCATAATTTCTAAGATTCAAATGCTCCAGCTCAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTGGATATGAGAGACAAGCTGACTACTTTTATTCTCAAGAACCCTCCTGAACAGAAGAAAGGATCCAAAGACAAGAAGGCCATGCGGAGAGCTGAGAAGGAGAGACTGAAGGAAGGTGAAGCAGCTGATGAAGAACAGAAAAAACTTAAGAAAGAGATTAAGAAGAAGGGCTCTACCACTTCCAAAGATGGCTCAACAAAGTCTAACTCCTCAAAGAAGAGAGCAAATGGCTCTGATGAAGAGCGTGCATCGCCTACTCACAGTCAAGTTGATGAGAAAGAGGAGGCCCATGATGACGATGGTGATGATGATGTCCAATGGCTAACAGACACATCTGCAGCAGCTGCTCAGCAACGTATCCAAGAACAGCTGAGTGCTGTGACAGCTGGTATGGTCATGCTCTCCACAGATGAGCCAGAAAAGAAGGCAAAAGcagcaaataaagaaaacgGTGCTTCTGAGAATGGTAACTCAATGCCCTGTAAGACTCTAGTTGAGGAAGTTAAAGCAAACCTGAAGAAAGGCGTTACTGCAAAAGAACTACAATCCCAGCTAGCTGTACTTTCTGCATCTGCCCAAGAGAAGATTAATGCTCTGTATGAAGCACTGTTTGACGGTGTTGAGAAAGGGTTTGCTAAAGAAGTGGTGAAGAAGAGGAGCTAccttgctgctgctgttgctgctCAAGAAGAGGGATCACAGTTGTTATTGCTTCATGCAATTGAGGATTTCTGTCACAAGTCCAGTTCCAGTGCTTTGAAGGAGATTGCTTTGGTTCTGAAGGCACTCTATGATGCTGATATTTTGGAGGAAGAGTACATAGTGCAGTGGTATCAAAACGGTCTGAAAGGTGATAAAAAGGATTCTCAGATTTGGAAGAATGCTCAACCCTTCATCGATTGGCTTCAGACTGCTGAGTCAGAAACAGATGAAGAATA 1487 0.4176 MSEQAIIHLGAIGLLGEYFPSSRIKYRPSTSRVSCMHPSASCDIQFACDLIIMALQNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGISLVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIISKIQMLQLKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEEQKKLKKEIKKKGSTTSKDGSTKSNSSKKRANGSDEERASPTHSQVDEKEEAHDDDGDDDVQWLTDTSAAAAQQRIQEQLSAVTAGMVMLSTDEPEKKAKAANKENGASENGNSMPCKTLVEEVKANLKKGVTAKELQSQLAVLSASAQEKINALYEALFDGVEKGFAKEVVKKRSYLAAAVAAQEEGSQLLLLHAIEDFCHKSSSSALKEIALVLKALYDADILEEEYIVQWYQNGLKGDKKDSQIWKNAQPFIDWLQTAESETDEE 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01750 495 MobiDBLite consensus disorder prediction 200 277 - -
Bva03g01750 495 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 53 495 - -
Bva03g01750 495 SUPERFAMILY ARM repeat 345 489 IPR016024 -
Bva03g01750 495 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 53 495 IPR045196 GO:0003743|GO:0006413
Bva03g01750 495 Gene3D - 157 197 - -
Bva03g01750 495 Pfam eIF4-gamma/eIF5/eIF2-epsilon 417 495 IPR003307 GO:0005515
Bva03g01750 495 SMART eIF2Bneu4 67 181 IPR002735 GO:0003743|GO:0006413
Bva03g01750 495 Coils Coil 211 231 - -
Bva03g01750 495 CDD W2_eIF5 345 493 - -
Bva03g01750 495 MobiDBLite consensus disorder prediction 322 342 - -
Bva03g01750 495 SMART 542_3 402 491 IPR003307 GO:0005515
Bva03g01750 495 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 62 153 IPR016189 GO:0003743|GO:0006413
Bva03g01750 495 Pfam Domain found in IF2B/IF5 63 179 IPR002735 GO:0003743|GO:0006413
Bva03g01750 495 Gene3D - 53 156 - -
Bva03g01750 495 Gene3D - 336 487 - -
Bva03g01750 495 MobiDBLite consensus disorder prediction 195 289 - -
Bva03g01750 495 ProSiteProfiles W2 domain profile. 334 495 IPR003307 GO:0005515
Bva03g01750 495 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 150 185 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01750 Bva-Chr3 15683775 15685374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01750 53 488 Eukaryotic Initiation Factors Gene Family AT1G77840 62.642 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01750 K03262 - gmx:100778073 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01750 03 15683775 15685374 Bva03g01750 03 15683775 15685374 ECH