Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01740 ATGATATGGAAAAGATTTGGCATCACAACTTCCATAATGAGCTTCGGTTTGCCCCAGAAGAGCCCAGTTTTGCTAACTGAGGCTCCTCTTAATCCCAAGGCCAATCGTGAGAAGATGACTCAAATCATGTTTGAGACCTTTAATACACCAGCTATGAATGTGGTCATTCAGGCTGTTCTTTCACTTTATGCAAGTGGTCGTCCAACTGGTAAGTG 215 0.4326 MIWKRFGITTSIMSFGLPQKSPVLLTEAPLNPKANREKMTQIMFETFNTPAMNVVIQAVLSLYASGRPTGK 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01740 71 Gene3D - 6 71 - -
Bva03g01740 71 PANTHER ACTIN 18 70 - -
Bva03g01740 71 CDD NBD_sugar-kinase_HSP70_actin 17 67 - -
Bva03g01740 71 SUPERFAMILY Actin-like ATPase domain 18 70 IPR043129 -
Bva03g01740 71 PANTHER ACTIN 18 70 IPR004000 -
Bva03g01740 71 ProSitePatterns Actins and actin-related proteins signature. 24 36 IPR020902 -
Bva03g01740 71 Pfam Actin 18 70 IPR004000 -
Bva03g01740 71 PRINTS Actin signature 35 48 IPR004000 -
Bva03g01740 71 PRINTS Actin signature 60 71 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01740 Bva-Chr3 15610697 15610912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01740 18 70 Cytoskeleton Gene Families AT3G12110 88.679 3.55e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01740 K05692 - pvm:113815121 97.4413