Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01719 ATGGAGTGGGATTTCTTGGGTTTGAGTTCAAAGAATAATGAAGAGGATGCAGCTTCTAGTTCCAAGGACTCAGctaGGGGTTCGAGAATGCAGTGGCCATTCTCAAACAGAGTCTCTGGGGTTCCTCAGTTGCTGTCCTTTAAGGCCGCTCAGGAAGATAGGACAAGGAAGACCATGGTTGATCCAGTAGCATCACAGGGATACATAAACGTATCAACTGCTGATGCTGTTGACTCCAACAACAACAGAACACTCTTGGGCGCTATGCAGaAAAATATGATTGTAGCTAAGCAAAGAGGAAATAGACATGGAACGACAGTGTATCCTATGCAACATTTGGGTGGACACTCAGCATTCCCTCAGGAAGCATCGATGTTTGGAGTGTCTAagcaatcaaatcaaatgagTAGACAGGTTCTACAATCTTCTAACCTTGTTTCCAGCGACCATCATATGCTCAATTCTGCCATTAAAACACGACATCTTGGAGGATTGCCGCCCATGACCCCAGTACCTGTTCTTCCTTTTAGAGGCTCAAGCTCCAATGTTGGAACCACTGACTTGAGGAATTCTTCCAAATCTTCTGCTACTGGCGCGCCTGCTCAGCTCACCATTTTCTACGGTGGTTCAGTGAATGTTTACAATGACATAACTCCGGAGAAGGCTCAAGATCTCATATTACTGGCTGGAAAGGGGTCTAATTCAAGTCAAAACAAGACAGTTTCCTCATCTCAAGTGCAAGCACCGATCTCTGTGCCCTCCAAAGATAATGCTTTTATCATGAGCCAATCCTATCCCACATCGCTACCTAGCCCTCTTCCAGGGAGAGGATCTTCTACCAACAATGAACTCAATATAATGACACCAGCAGCATTTTCAGTTACCCGAAGTAACCTGTTGGAGTCTCCTACACCAGTTGGTTCTTCAGTCGTGCCTCAGGTGCCTCAAGCACGTAAGAAAAGCTTGGCTCGGTTTCTAGAGAAGCGCAAAGATAGGCTGTCGAGTGTATCACCATACTCCACGAATATGAGGCCTGGATCTGGTAGAGATTGCTTCTTCTCTCTCAACTCTTCTGGTTTTTTTCCTCTACGAGCCGTCGACTA 1103 0.4515 MEWDFLGLSSKNNEEDAASSSKDSARGSRMQWPFSNRVSGVPQLLSFKAAQEDRTRKTMVDPVASQGYINVSTADAVDSNNNRTLLGAMQKNMIVAKQRGNRHGTTVYPMQHLGGHSAFPQEASMFGVSKQSNQMSRQVLQSSNLVSSDHHMLNSAIKTRHLGGLPPMTPVPVLPFRGSSSNVGTTDLRNSSKSSATGAPAQLTIFYGGSVNVYNDITPEKAQDLILLAGKGSNSSQNKTVSSSQVQAPISVPSKDNAFIMSQSYPTSLPSPLPGRGSSTNNELNIMTPAAFSVTRSNLLESPTPVGSSVVPQVPQARKKSLARFLEKRKDRLSSVSPYSTNMRPGSGRDCFFSLNSSGFFPLRAVD 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01719 367 ProSiteProfiles Tify domain profile. 196 231 IPR010399 -
Bva03g01719 367 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 270 359 - -
Bva03g01719 367 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 30 279 - -
Bva03g01719 367 Pfam tify domain 199 230 IPR010399 -
Bva03g01719 367 Pfam Jas motif 315 340 IPR018467 -
Bva03g01719 367 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 270 359 IPR040390 -
Bva03g01719 367 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 30 279 IPR040390 -
Bva03g01719 367 SMART tify_2 196 231 IPR010399 -
Bva03g01719 367 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01719 Bva-Chr3 15471977 15475355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01719 30 351 Tify Gene Family AT3G17860 35.693 1.01e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva03g01719 tify 2.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01719 K13464 - gmx:100807288 266.544