Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01717 ATGCAGCTTCTGAAACTCCTTATTTTGCTTCCCCTCTTGCTCGTTCTGCTTCCTCTGGTGAAACCAGATCTGGGTTCCGAGCGAGCTGCTCTCTTGGCTCTCCGTAAGGCGTTGGGTGGCCGAACCCTGTTATGGAACGTTACAGAGCCGAGTCACTGCAAGTGGGCTGGTGTACAATGCGAGAAGGACCAAGTCGTTGAGATTCATCTTCCTGGTGTAGCGCTTTCAGGCCAATTACCCACTGGCATTTTCGGCAACTTGACTCACCTGCGCACTCTTAGTCTTCGTGTTAATGCCTTAACTGGTGGGTTGCCTTCAGATCTCGCTTCTTGTGTCAATCTTCGCAACCTTTACTTGCagcaaaatttgttttctggGGAAATTCCAGACCTTTTGTTTAGTCTACCCGATTTGGTGCGGCTTAATTTGGCGTCCAACAATTTTTCCGGTGAGATTCCACCAGATTTCAACAAATTGGTAAGGTTGAAGACTCTTTTTCTGGAGAATAACAAGCTTTCAGGTTCCATCCCTGAATGGGACGCATTAAAGCTTGAGCAGTTCAATGTTTCGAACAATTTGCTAAATGGGTCAGTACCAGAAAAGTTGCAGACTTTTTCTCAAGACTCATTCCTGGGTAATTCGTTATGTGGGAAGCCCCTTGATCTTTGTCCGGGAGATAATGGAACTTCCGCAGCTTTGCCGGGTGGGATTGAAACCAATGAAGGgggcaagaagaagaaattgtcTGGCGGTGCCATTGCCGGGATCGTTGTTGGATCTGCTGTGTGTCTTTTGTTCATTCTATTCGTCTTGATCCTTCTGTGCAGAAAGAAGAGCAGCAAGAAGACAAGCTCAGTTGATATTGCAACTGTTAAGCAACCAGAAGTGGAAATTCCTGGTGAGAAACCTGTCTCTGATGTGGAGAACGGTGGTCACAATAATGGTTTTTCAGTGGCTGCGGCAGCGGCAGCAGCAATGACAGGGAATACCAAAGTAGAAGCTAACAGTACTGGAGCTAAGAAGTTGGTATTCTTTGGTAATTCACCAAGGGTTTTTGATCTAGAGGATTTGCTAAGAGCTTCCGCTGAGGTTTTAGGCAAAGGGACATTTGGCACAGCATATAAGGCTGTTATGGAGATCGGGCCTGTGGTGGCTGTAAAAAGGTTGAAGGATGTGACAATTACTGAGAAGGAATTCAAGGAGAAAATTGAATCTGTGGGTGCAATGGATCAAGAGAATCTGGTCCCTCTCAGGGCTTACTATTTTAGCAGGGATGAAAAGCTTCTTGTCTATGATTACATGCCCATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGGGCAGGCAGAACGCCATTGAACTGGGAAACTAGATCAGGCATTGCACTTGGAGCTGCTCGTGGAATCGAGTACTTGCATTCACAAGGCCCTAACGTTTCTCATGGAAACATAAAATCATCTAACATCCTCCTAACAAAATCCTATGATGCCAGAGTGTCTGATTTTGGTCTTGCACACCTTGTTGGTCCCTCCTCGACTCCCAACCGAGTTGCTGGGTACCGTGCACCCGAGGTAACTGACCCACGGAAAGTGTCCCAAAAGGCAGATGTGTACAGTTTTGGAGTGTTGCTGTTGGAACTTCTCACTGGAAAGGCTCCCACCCATGCTCTCCTAAACGAGGAAGGAGTGGACCTTCCCAGATGGGTGCAATCCGTTGTAAGAGAAGAGTGGACATCTGAAGTTTTCGACCTTGAGCTCCTTAGGTACCAGAATGTTGAAGAGGAAATGGTTCAGATGTTGCAACTTGCAGTGGATTGTGCAGCTCAATATCCTGACAAGCGCCCTTCAATGCCTGAAGTCACAAGGCGCATTCAAGAGTTGCGTCATTCTAGTGTCAAAGAGGATCAAGACCAAATCCAACAGCCTGATATGATCAATGATATAGAATCATA 1955 0.4563 MQLLKLLILLPLLLVLLPLVKPDLGSERAALLALRKALGGRTLLWNVTEPSHCKWAGVQCEKDQVVEIHLPGVALSGQLPTGIFGNLTHLRTLSLRVNALTGGLPSDLASCVNLRNLYLQQNLFSGEIPDLLFSLPDLVRLNLASNNFSGEIPPDFNKLVRLKTLFLENNKLSGSIPEWDALKLEQFNVSNNLLNGSVPEKLQTFSQDSFLGNSLCGKPLDLCPGDNGTSAALPGGIETNEGGKKKKLSGGAIAGIVVGSAVCLLFILFVLILLCRKKSSKKTSSVDIATVKQPEVEIPGEKPVSDVENGGHNNGFSVAAAAAAAMTGNTKVEANSTGAKKLVFFGNSPRVFDLEDLLRASAEVLGKGTFGTAYKAVMEIGPVVAVKRLKDVTITEKEFKEKIESVGAMDQENLVPLRAYYFSRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWETRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQMLQLAVDCAAQYPDKRPSMPEVTRRIQELRHSSVKEDQDQIQQPDMINDIES 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01717 651 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Bva03g01717 651 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Bva03g01717 651 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
Bva03g01717 651 Gene3D Transferase(Phosphotransferase) domain 1 434 650 - -
Bva03g01717 651 ProSiteProfiles Protein kinase domain profile. 359 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01717 651 Pfam Protein kinase domain 362 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01717 651 PANTHER OS05G0588300 PROTEIN 8 650 - -
Bva03g01717 651 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 650 - -
Bva03g01717 651 MobiDBLite consensus disorder prediction 627 651 - -
Bva03g01717 651 Gene3D Phosphorylase Kinase; domain 1 324 433 - -
Bva03g01717 651 SUPERFAMILY Protein kinase-like (PK-like) 363 629 IPR011009 -
Bva03g01717 651 CDD STKc_IRAK 365 628 - -
Bva03g01717 651 Pfam Leucine rich repeat N-terminal domain 26 60 IPR013210 -
Bva03g01717 651 Gene3D Ribonuclease Inhibitor 184 223 IPR032675 -
Bva03g01717 651 SUPERFAMILY L domain-like 45 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01717 Bva-Chr3 15449919 15452968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01717 23 644 Receptor kinase-like Gene Family AT1G48480 65.723 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva03g01717 Pkinase 3.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01717 - - pavi:110746300 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01717 03 15449919 15452968 Bva03g01717 03 15449919 15452968 BWGD